CX294744

Overview
NameCX294744
Unique NameCX294744
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_DROME (Protein pelota OS=Drosophila melanogaster GN=pelo PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 8.761e-56
Identity = 100/205 (48.78%), Postives = 149/205 (72.68%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +  VLR++G+NI EN++VK+GA+HTL++EL+R F LRK  WD++AL+ +  A DPT SAD+A V+MQEGLAH+ L+  SMT+ RS+IE SIPRK   ++  +E  L KF+E V+Q+ L+HV+F+VV+C +IASPGF +DQF+ ++  +A +   + +++NKS+ +LVH SSG+KHSLRE+L
Sbjct:   53 TGSSTSSRVRTTLTIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTIALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFYEQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKHSLREIL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_DANRE (Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.975e-51
Identity = 93/205 (45.37%), Postives = 145/205 (70.73%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI EN++VK+GA+HT+E+EL+R F L K +WDS+ LD + QA DP   AD+A V+MQEGLA+++LV  +MT+ R+++E +IPRK   +   ++ AL +F+E V+Q  L+H +F+VV+C ++ASPGF KDQF  +L  EA R+  + ++EN+S+ ++VH+SSG+K+SL+EVL
Sbjct:   53 TGSVGSSRVRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSVVLDRIEQACDPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDKALERFYEAVMQGILRHFNFDVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKFMVVHSSSGHKYSLKEVL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_XENLA (Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.225e-49
Identity = 96/205 (46.83%), Postives = 139/205 (67.80%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI EN++VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAHI LV  SMT+ R++IETSIPRK       +E AL KF+E V+Q  L+H++F+VV+  ++ASPGF ++QF   L L A ++ L+ ++EN+ + + VH+SSG K+SL EVL
Sbjct:   53 TGSVGSNRVRTTLTICVETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSIVLERIEQACDPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEKALEKFYEQVMQGILRHINFDVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKFLQVHSSSGRKYSLTEVL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_RAT (Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.656e-49
Identity = 91/205 (44.39%), Postives = 141/205 (68.78%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAH+ LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H++F VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH SSG+K+SL+EVL
Sbjct:   53 TGSVGSNRVRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEVL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_PONAB (Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.082e-49
Identity = 92/205 (44.88%), Postives = 141/205 (68.78%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAHI LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H+ F+VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH SSG+K+SL+EVL
Sbjct:   53 TGSVGSNRVRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEVL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_MOUSE (Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.037e-48
Identity = 90/205 (43.90%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAH+ LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H++F VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH SSG+K+SL+E L
Sbjct:   53 TGSVGSNRVRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEAL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_BOVIN (Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.037e-48
Identity = 91/205 (44.39%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAHI LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H+ F+VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH SSG+K+SL+E L
Sbjct:   53 TGSVGSNRVRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEAL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_HUMAN (Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.769e-48
Identity = 91/205 (44.39%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  SAD+A V+MQEGLAHI LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H+ F+VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH SSG+K+SL+E L
Sbjct:   53 TGSVGSNRVRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEAL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: PELO_CHICK (Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.147e-47
Identity = 88/205 (42.93%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +GS  + R            D+D +   LR++G NI ENE+VK+GA+HT+E+E +R F L K  WDS+ L+ + QA DP  +AD+A V+MQEGLAH+ LV  SMT+TR+++E +IPRK     + ++ AL +F+E V+QA  +H++F VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+ + VH+SSG+K+ L+E L
Sbjct:   53 TGSVGSNRIRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHSSSGHKYVLKEAL 257          
BLAST of CX294744 vs. ExPASy Swiss-Prot
Match: YNU6_CAEEL (Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 82/205 (40.00%), Postives = 135/205 (65.85%), Query Frame = 1
Query:    1 SGSRDAERXXXXXXXXXXXXDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVL 615
            +G+  ++R            D+D     L ++G+NI EN+ VK+GA+HT+++E +R F L+K  WDS+ L+ L+ A DP  +AD+A V++ EGLA++ L+  +MT+TR++I+ +IPRK     + +E  L KF+E V  AF++HV+  VV+C ++AS GF KD F +HL+  A+    +   E +++ +L H+SSG+KH+L+EVL
Sbjct:   53 TGTTSSQRVHTMLTVSVESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSIDLERLNLALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEKGLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKFMLTHSSSGFKHALKEVL 257          
The following BLAST results are available for this feature:
BLAST of CX294744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PELO_DROME8.761e-5648.78Protein pelota OS=Drosophila melanogaster GN=pelo ... [more]
PELO_DANRE4.975e-5145.37Protein pelota homolog OS=Danio rerio GN=pelo PE=2... [more]
PELO_XENLA1.225e-4946.83Protein pelota homolog OS=Xenopus laevis GN=pelo P... [more]
PELO_RAT4.656e-4944.39Protein pelota homolog OS=Rattus norvegicus GN=Pel... [more]
PELO_PONAB6.082e-4944.88Protein pelota homolog OS=Pongo abelii GN=PELO PE=... [more]
PELO_MOUSE1.037e-4843.90Protein pelota homolog OS=Mus musculus GN=Pelo PE=... [more]
PELO_BOVIN1.037e-4844.39Protein pelota homolog OS=Bos taurus GN=PELO PE=2 ... [more]
PELO_HUMAN1.769e-4844.39Protein pelota homolog OS=Homo sapiens GN=PELO PE=... [more]
PELO_CHICK1.147e-4742.93Protein pelota homolog OS=Gallus gallus GN=PELO PE... [more]
YNU6_CAEEL2.238e-4340.00Uncharacterized protein R74.6 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionC05055D10SK FlavSen1 Citrus clementina cDNA clone C05055D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294744 ID=CX294744; Name=CX294744; organism=Citrus clementina; type=EST; length=617bp
TCTGGTTCAAGAGATGCAGAGCGTGTCAAGCTTAAGTTGGAAATCAAAGT
TGAGGTGGTGGATTATGACAAAGAAGGGTCTGTATTGCGTATACGTGGAA
AGAATATCCTAGAAAATGAACATGTTAAAATTGGAGCTTTCCATACTTTG
GAGATTGAGCTGCATCGAGCATTTGTGTTGAGAAAGGATCTCTGGGACTC
ATTGGCCTTAGATACACTTCATCAGGCAGCAGATCCAACTGCCAGTGCAG
ATCTTGCAGTTGTTTTAATGCAAGAAGGTTTAGCACATATCCTCCTTGTT
GGTAGAAGCATGACGATCACTCGTTCACGAATAGAAACTTCAATTCCTCG
CAAGCATGGTCCTGCAATTGCTGGTTATGAGTCGGCTTTGAATAAGTTCT
TTGAGAATGTTCTACAGGCTTTCCTGAAACATGTTGATTTCAATGTGGTT
CGGTGTGCTGTGATTGCAAGTCCTGGTTTCACAAAGGATCAGTTTCATCG
TCACCTATTATTAGAGGCAGAAAGAAGGCAGTTGAGACCAATTATTGAGA
ACAAGTCACGCATAATTCTTGTCCATACAAGTTCTGGATACAAGCATAGT
TTGAGAGAGGTATTGGA
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