CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 7.220e-87 Identity = 170/202 (84.16%), Postives = 179/202 (88.61%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 FD + LGS I+IKGTKT+SAVSLILRGANDYMLDEMERALHDA+C VKRTLESNTVVAGGGAVESALSVYLE+LATTLGSREQLA+AEFA++LLIIPKVLAVNAAKDATELVAKLRAYHH AQTKADKKH SSMGLDL GTIRNNLEAGVIEPAMSKVKIIQF TEAAITILRIDDMIKL+KDESQ E Sbjct: 343 FDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAEFADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 4.263e-63 Identity = 121/202 (59.90%), Postives = 156/202 (77.23%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 FD+S++G I+IKGTK +A S+ILRG ND+ DEMER++HDA+C VKR LES VVAGGG VE+ALS+YLE AT+L SREQLA+AEFA+SLL+IPK L+VNAAKDAT+LVAKLR+YH+++QTK ++ L GLDL +G +R+N +AGV+EPAMSK+K ++F TEAAITILRIDDMIKL ++ + Sbjct: 343 FDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLNPEDKSGK 544
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 8.888e-61 Identity = 123/198 (62.12%), Postives = 152/198 (76.77%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDE 595 FD+SLLG I+IKG K+ +A S+ILRGAND MLDEMER++HD++C V+R LES +VAGGGAVE++LS++LE A TL SREQLA+AEFA +LLIIPKVLA NAA+D+T+LV KLRAYH AQ +HL GLDL +GTIR+N EAG++EPA+SKVK ++F TEAAITILRIDD+IKL K E Sbjct: 343 FDASLLGHADEIVQERISDDELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDKQE 540
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 5.761e-60 Identity = 118/202 (58.42%), Postives = 151/202 (74.75%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 F++S+LG I+IK TK ++ S+ILRGAND+M DEMER+LHDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLLIIP LAVNAA+D+T+LVAKLRA+H+ AQ ++K+L +GLDL G R+N + GV EP M KVK ++F TEAAITILRIDD+IKL + ++ Sbjct: 340 FEASMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59 Identity = 117/202 (57.92%), Postives = 151/202 (74.75%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 F++S+LG I+IK TK ++ S+ILRGAND+M DEMER++HDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLLIIP LAVNAA+DAT+LVAKLRA+H+ AQ ++K+L +GLDL G R+N +AGV EP + K K ++F TEAAITILRIDD+IKL + ++ Sbjct: 343 FEASMLGQAEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSIHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDATDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLIKLHPESKDDK 544
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59 Identity = 116/202 (57.43%), Postives = 153/202 (75.74%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 F++++LG I+IK TK ++ S+ILRGAND+M DEMER+LHDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLL+IP LAVNAA+D+T+LVAKLRA+H+ AQ ++K+L +GLDL+ G R+N +AGV EP + KVK ++F TEAAITILRIDD+IKL + ++ Sbjct: 340 FEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59 Identity = 116/202 (57.43%), Postives = 153/202 (75.74%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 F++++LG I+IK TK ++ S+ILRGAND+M DEMER+LHDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLL+IP LAVNAA+D+T+LVAKLRA+H+ AQ ++K+L +GLDL+ G R+N +AGV EP + KVK ++F TEAAITILRIDD+IKL + ++ Sbjct: 340 FEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59 Identity = 119/200 (59.50%), Postives = 152/200 (76.00%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQ 601 FD++ LG I++K + SA S+ILRGAN+ MLDEMER++HD++C VKRTLES T+V GGGAVESALS+YL+ +A T+GSR+QLA++EFAESLL++PK LAVNAA DA++LV+KL+AYHHAAQT KK + GLDL +RNNLEAGV+EPA++K+K I+F TE+AITILRIDD I L E Q Sbjct: 341 FDTTALGIADEVVQDRLADDELIIVKNSNKKSA-SIILRGANELMLDEMERSIHDSLCIVKRTLESGTIVPGGGAVESALSIYLDNIAATMGSRKQLAISEFAESLLVVPKQLAVNAALDASDLVSKLKAYHHAAQTDPSKKSYAYSGLDLFNNKVRNNLEAGVLEPAIAKIKCIKFATESAITILRIDDKITLNPREQQ 539
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.189e-59 Identity = 116/202 (57.43%), Postives = 152/202 (75.25%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 F++++LG I+IK TK ++ S+ILRGAND+M DEMER+LHDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLL+IP LAVNAA+D+T+LVAKLRA+H+ AQ ++K+L +GLDL G R+N +AGV EP + KVK ++F TEAAITILRIDD+IKL + ++ Sbjct: 340 FEATMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.859e-59 Identity = 116/194 (59.79%), Postives = 149/194 (76.80%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKL 583 F++++LG I+IK TK ++ S+ILRGAND+M DEMER+LHDA+C VKR LES +VV GGGAVE+ALS+YLE AT++GSREQLA+AEFA SLL+IP LAVNAA+D+T+LVAKLRA+H+ AQ ++K+L +GLDL G R+N +AGV EP + KVK ++F TEAAITILRIDD+IKL Sbjct: 340 FEATMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKL 533 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |