CX294746

Overview
NameCX294746
Unique NameCX294746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38
Identity = 87/187 (46.52%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GFE  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   LTE+ K  IK++L
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLL 343          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38
Identity = 87/187 (46.52%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GFE  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   LTE+ K  IK++L
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLL 343          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37
Identity = 86/187 (45.99%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GFE  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   LTE+ +  IK++L
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLL 343          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37
Identity = 86/187 (45.99%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GFE  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   LTE+ +  IK++L
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLL 343          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37
Identity = 86/196 (43.88%), Postives = 112/196 (57.14%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVLG*DILSKCF 583
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GF+  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   LTE+ +  IK++L    + K +
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLNQGSVQKVY 352          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37
Identity = 84/187 (44.92%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++              GF+  I HLD H V IS   IT+P       GEG+P    +N KG L ITF+V FP   L+E+ +  IK++L
Sbjct:  157 KPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.186e-37
Identity = 79/187 (42.25%), Postives = 114/187 (60.96%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V K   G R+CNCR+E+  +Q+G G FQ    +VCD+C NVK  +E   + V++E G  +G + +F+ +GEP I+G+PGDLKF+IR   H RF R+G++              GFE  I+HLD H+V +    +T P    +   EGMP L  +NKKG L +TF+V FP T L+++QK +I E+L
Sbjct:  156 KAVYKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPNVKLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGHIVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEIL 342          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.897e-32
Identity = 79/214 (36.92%), Postives = 112/214 (52.34%), Query Frame = 2
Query:    2 KNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD---------------------------RFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFP-TTLTEDQKTRIKEVL 556
            K V K   G R+CNCR+E+  +Q+G G FQ    +VCD+C NVK  +E   + V++E G  +G   +F+ +GEP I+G+PGDLKF+IR   H                            RF R+G++              GFE  I HLD H+V +    +T P    +   EGMP +  +NKKG L +TF+V FP T LT++QK +I E+L
Sbjct:  156 KAVYKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPNVKLVQENKVLEVEVEVGADEGHTQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGHMVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQKAQIIEIL 369          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 55/182 (30.22%), Postives = 88/182 (48.35%), Query Frame = 2
Query:   65 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEH--LVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            +Q+GPGM QQM                   C QC+  K  ++   + V +EKGMQ+GQ++ F  + +   D   GD+ F ++   H +F+R+G++              GF+  + HLD    L+  +   + KP + +    EGMP++     +G LYI F V FP +LT DQ   ++ VL
Sbjct:  177 RQLGPGMIQQMQHPCNECKGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVL 358          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17
Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 2
Query:   53 EVYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKG--ITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFP 511
            +++ +QIGPGM QQ+                +  C+ C   K  RE   + V +EKGM+DGQ+++F+ +G+ + + EPGD+   +    H  F+R G++              GF+KTI+ LD  ++ I++K   + K  ++R    EGMP++ +  +KG L I F V+FP
Sbjct:  160 QIHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFP 330          
The following BLAST results are available for this feature:
BLAST of CX294746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DJB11_RAT6.361e-3846.52DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]
DJB11_MOUSE6.361e-3846.52DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_PONAB1.085e-3745.99DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN1.085e-3745.99DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
DJB11_CANFA1.851e-3743.88DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB11_BOVIN5.385e-3744.92DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNJ20_CAEEL9.186e-3742.25DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNJ20_CAEBR8.897e-3236.92DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNJH2_ALLPO9.550e-1830.22DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJA4_HUMAN1.247e-1731.58DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionC05055D12SK FlavSen1 Citrus clementina cDNA clone C05055D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294746 ID=CX294746; Name=CX294746; organism=Citrus clementina; type=EST; length=711bp
GAAAAATGTTATAAAGCCAGCCCCAGGCAAAAGGCGCTGTAACTGCAGAA
ATGAGGTATATCACAAACAAATTGGTCCTGGCATGTTCCAACAGATGACT
GAGCAGGTCTGCGATCAATGCCAAAATGTTAAATATGAGAGAGAGGGATA
TTTTGTAACAGTTGATATTGAAAAAGGGATGCAAGATGGACAAGAGGTGG
TTTTCTATGAAGATGGTGAGCCCAAAATTGATGGAGAACCTGGAGATTTG
AAGTTCCGTATTCGCACAGCACCCCATGATCGCTTCAGAAGGGAAGGAAA
TAACTTGCACACAACTGTCACTGTCACGCTGGTTCAAGCTCTTGTTGGTT
TTGAGAAGACCATTGAGCACCTTGACGAACATTTAGTTGACATCAGCACA
AAGGGAATCACTAAGCCCAAGGAAGTGAGGAAGTTCGGAGGGGAAGGAAT
GCCATTGCATTTTAGCAACAAGAAAGGAGACCTCTATATCACATTTGAGG
TACTATTCCCAACAACTCTAACAGAGGATCAGAAGACAAGGATCAAGGAA
GTTCTTGGCTAGGATATATTAAGTAAATGTTTTTATTTGGGTTCTTAGGC
GTTCCCACTGTAACATGATGAGGTCACATTGCAAATTTAGGAACTATTTT
GGGTCTCTTGATAACAAGTAGTGCAAGTCTAAGATGCCTTACTGCATACT
GTCATTGTTTG
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