CX294752

Overview
NameCX294752
Unique NameCX294752
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length460
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9418 contig Ccv1_Contig9418:6..465. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294752 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.446e-30
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1
Query:   43 MEVVQVLHMNVGVGGTCYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT-KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ------LGSASGAAGQCFFTGVPGSF 459
            MEV+++LHMN G G T YA NS+VQ  +IS+ + + +EA+ KL    S      IADLGCSSGPN+LL  S +++ +  +C  L   +PE  + LNDLP NDFN IF SL  F   ++K+      LG   G+ G CF + VPGSF
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSF 146          
BLAST of CX294752 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.027e-28
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 1
Query:   43 MEVVQVLHMNVGVGGTCYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL---RKQLGSASGAAGQCFFTGVPGSF 459
            MEV++VLHMN G G T YA NS  Q  +IS+ + + +EA+ KL  S S  + + IADLGCSSGPN+LL  S ++  ++ +C  L   +PE +V LNDLP NDFN I  SL  F   +   ++ LG   G    CF + VPGSF
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSF 143          
BLAST of CX294752 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.905e-17
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   55 QVLHMNV-GVGGTCYASNSLVQEKVISIAKPITEEAMTKLFCSTS--PTKVAIADLGCSSGPNTLLVASELIKVVNKI-CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSF 459
            ++L MN+ G G T YA+NS +Q+ ++S +  + +E +  +       P    + D+GCSSGPN LLV S +I  +  +  +K  ++LPEF+VFLNDLP NDFN +F+ L              S   G CF  G+PGSF
Sbjct:    6 KLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL--------------SHENGNCFVYGLPGSF 130          
BLAST of CX294752 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.319e-11
Identity = 57/146 (39.04%), Postives = 68/146 (46.58%), Query Frame = 1
Query:   55 QVLHMNVGVGGTCYASNSLVQEKVISIAKPITEEAMTK------LFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSF 459
            Q   MN G G   Y  NS  Q+  I  AK  T EA+ K      L  ++    + IAD GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+    Q I  KQ              GVPGSF
Sbjct:    6 QSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQKNLKENNAYIGAPL-EFQVCFNDQPNNDFNTLFRT----QPISSKQ---------AYLSVGVPGSF 137          
The following BLAST results are available for this feature:
BLAST of CX294752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
JMT_BRARP5.446e-3045.89Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH1.027e-2846.15Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA6.905e-1738.85Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT799_ARATH3.319e-1139.04Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC05055E06SK FlavSen1 Citrus clementina cDNA clone C05055E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294752 ID=CX294752; Name=CX294752; organism=Citrus clementina; type=EST; length=460bp
GATCAAACGAGTGAGCGAGAAACAGAGAATACTGTGCGAGAGATGGAGGT
GGTCCAAGTGCTTCACATGAATGTAGGAGTAGGAGGCACATGTTATGCCA
GTAATTCACTGGTTCAGGAAAAAGTCATATCCATTGCAAAGCCAATCACA
GAGGAAGCCATGACCAAACTCTTCTGCAGCACGTCCCCAACAAAGGTAGC
AATTGCCGACTTGGGCTGTTCTTCAGGACCAAACACTTTGCTTGTGGCAT
CTGAACTTATCAAAGTAGTGAACAAGATCTGCGATAAGTTGGGCAGTCAA
TTACCAGAATTTCAAGTGTTCCTGAACGATCTTCCAGGGAATGACTTTAA
CACCATTTTCAGGTCTTTAGCAAGCTTCCAAAAGATACTGAGAAAGCAAT
TAGGGTCGGCCTCTGGNGCAGCTGGGCAGTGCTTCTTCACTGGGGTCCCT
GGTTCTTTCT
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