CX294755

Overview
NameCX294755
Unique NameCX294755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294755 vs. ExPASy Swiss-Prot
Match: SENP8_RAT (Sentrin-specific protease 8 OS=Rattus norvegicus GN=Senp8 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  145 DDKILSYNDVVLRRSDLDILSGPYFLNDRIIEFYFSYLSSCLV---SQDILLVPPSIAFWILNCPDATYLKEFIEPLKLPEKKLVIFPVNDNDDMSLAEGGSHWSLIVYERNGNVFVHHDSNHRMNKIKARXLFSAVVGFMG 561
            D  +LSY D +LR+SD+ +L  P +LND II F F Y +S      S  +  + P +  +I        +  F+EPL LP K++V   +NDN +   A GG+HWSL+VY ++ N F H+DS+ R N I A+ +   +  F+G
Sbjct:    2 DPVVLSYMDSLLRQSDVSLLDPPNWLNDHIIGFAFEYFASSQFHDCSDHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQ--AAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLG 141          
BLAST of CX294755 vs. ExPASy Swiss-Prot
Match: SENP8_MOUSE (Sentrin-specific protease 8 OS=Mus musculus GN=Senp8 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 53/142 (37.32%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  145 DDKILSYNDVVLRRSDLDILSGPYFLNDRIIEFYFSYLSSCLV---SQDILLVPPSIAFWILNCPDATYLKEFIEPLKLPEKKLVIFPVNDNDDMSLAEGGSHWSLIVYERNGNVFVHHDSNHRMNKIKARXLFSAVVGFMG 561
            D  +LSY D +LR+SD+ +L  P +LND II F F Y ++      S  +  + P +  +I        +  F+EPL LP K++V   +NDN +   A GG+HWSL+VY ++ N F H+DS+ R N I A+ +   +  F+G
Sbjct:    2 DPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQ--AAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLG 141          
BLAST of CX294755 vs. ExPASy Swiss-Prot
Match: SENP8_HUMAN (Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = 1
Query:  145 DDKILSYNDVVLRRSDLDILSGPYFLNDRIIEFYFSYLSSCLV---SQDILLVPPSIAFWILNCPDATYLKEFIEPLKLPEKKLVIFPVNDNDDMSLAEGGSHWSLIVYERNGNVFVHHDSNHRMNKIKARXLFSAVVGFMG 561
            D  +LSY D +LR+SD+ +L  P +LND II F F Y ++      S  +  + P +  +I    +   +  F+EPL LP K++V   +NDN +   A GG+HWSL+VY ++ N F H+DS+ R N + A+ +   +  F+G
Sbjct:    2 DPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQ--AAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLG 141          
BLAST of CX294755 vs. ExPASy Swiss-Prot
Match: SENP8_DICDI (Probable sentrin-specific protease 8 OS=Dictyostelium discoideum GN=senp8 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.623e-16
Identity = 45/140 (32.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  142 ADDKILSYNDVVLRRSDLDILSGPYFLNDRIIEFYFSYL------SSCLVSQDILLVPPSIAFWILNCPDATYLK-EFIEPLKLPEKKLVIFPVNDNDDMSLAEGGSHWSLIVYERNGNVFVHHDSNHRMNKIKARXLFS 540
            +D  I+SYND  + +SD++IL    +LND II FY  +L      +   +   +LL+ PS+ F          ++  F +PL L  K+++ FP+ +N D ++  GG+HWSL+++ ++ N F+++DS +  N   A  + S
Sbjct:    2 SDPLIVSYNDSAIYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLLSPSVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFIKSLNKFIYYDSINSFNSSDAIFIIS 141          

HSP 2 Score: 20.4014 bits (41), Expect = 5.623e-16
Identity = 6/7 (85.71%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  621 NGYDCGV 641
            NGYDCG+
Sbjct:  170 NGYDCGL 176          
The following BLAST results are available for this feature:
BLAST of CX294755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SENP8_RAT2.251e-2138.03Sentrin-specific protease 8 OS=Rattus norvegicus G... [more]
SENP8_MOUSE5.014e-2137.32Sentrin-specific protease 8 OS=Mus musculus GN=Sen... [more]
SENP8_HUMAN6.549e-2136.62Sentrin-specific protease 8 OS=Homo sapiens GN=SEN... [more]
SENP8_DICDI5.623e-1632.14Probable sentrin-specific protease 8 OS=Dictyostel... [more]
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Properties
Property NameValue
Genbank descriptionC05055E09SK FlavSen1 Citrus clementina cDNA clone C05055E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294755 ID=CX294755; Name=CX294755; organism=Citrus clementina; type=EST; length=683bp
GAATAGCAAGCCAGGATAGATAGGATTGCCGATAAATAAATATCAGTCTG
CATACAGCTTTCTGCTTCGTTCAGCTTTTTGCCATCTTTTATCATTTTTC
TGAATCAGTTCATTGATATCTGCATAATGGGAAAATCTGCAGCTGATGAC
AAGATCCTAAGCTACAACGATGTTGTTCTTAGGAGATCAGATTTGGACAT
CCTGAGTGGCCCATATTTTCTGAATGACAGAATCATCGAGTTTTATTTTA
GCTATCTTTCATCATGCCTTGTTTCACAAGACATCCTACTGGTTCCGCCT
TCAATTGCTTTCTGGATATTAAATTGCCCAGATGCTACATATCTGAAGGA
GTTCATAGAACCGCTTAAATTGCCGGAGAAGAAACTGGTGATCTTTCCTG
TTAATGACAATGATGACATGAGTCTTGCTGAAGGGGGAAGTCACTGGAGC
TTAATTGTGTATGAGAGAAATGGTAATGTGTTTGTGCATCATGATAGCAA
TCACAGGATGAATAAAATAAAAGCAAGANAACTTTTTTCAGCTGTGGTGG
GATTTATGGGTGATTCAACTTCAGCATCTAAACGGCAGTATTTGGATTGT
GTTGATTCACCACAACAACCAATGGTTATGATTGTGGAGTTATGTTATGC
CATTGCAGAGCTATATGTGCTGTATGAGAGTAG
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