CX294773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 9.801e-56 Identity = 99/139 (71.22%), Postives = 112/139 (80.58%), Query Frame = 1 Query: 151 RKPKSRPNPAFKLPHRHTRYYKPVNPGVISSDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGXKGVKHVEMPGPFPLGKYPQEGKTREE 567 +KP+S NPA KLPH TRYYKPV GVISSDGDR + IG+SGVSY+LPGAPFEFQ+SY+ETP+ KP+ IREPAF+PF PPTMPRPWTGK PL IPLFDSFNPP G GVK+VEMPGP P G+YP+EG REE Sbjct: 61 KKPQS--NPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSETPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREE 197
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.576e-29 Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 256 GVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGXKGVKHVEMPGPFPLGKYPQ-EGKTREE 567 GV + E G++Y L GAPFEFQYSYTETP+A+P+A+RE FLPFGP PRPWTG++PL +P FDSF P PG KGVK V+ PGPF G P+ + +REE Sbjct: 75 GVRVTERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREE 179
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.510e-29 Identity = 59/105 (56.19%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 256 GVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGXKGVKHVEMPGPFPLGKYPQ-EGKTREE 567 GV + + G+SYRL GAPFEFQYSYTE P+A+P+A+RE F+PFGP PRPWTG++PL +P FDSF P PG KGVK V+ PGPF G P+ + +RE+ Sbjct: 75 GVRVTDRGISYRLDGAPFEFQYSYTEAPRARPVALREAPFMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLPAPGKKGVKPVQSPGPFLAGMEPRYQSVSRED 179
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.475e-27 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 172 NPAFKLPHRHTRYYKPVNPGVISSDGD-------------RGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPL 429 NPAF+ H T Y KPV P + +G+ R V +G SG+S+RLPGAPF+FQ+SY+E P+A PLAIREPAFLPF PPTMPRPWTGK PL Sbjct: 74 NPAFRAAHLRTAYRKPVPPAAAAGEGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPL 172
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.286e-27 Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 172 NPAFKLPHRHTRYYKPVNPGVISSDGD-------------RGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPL 429 NPAF+ PH T Y KPV P + +G+ R V +G SG+S+RLPGAPF+F++SY+E P+A P+AIREPAFLPF PPTMPRPWTGK PL Sbjct: 70 NPAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFDFRFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPL 168
BLAST of CX294773 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.633e-26 Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 160 KSRPNPAF----KLPHRHTRYYKPVN--------PGVISS----DGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGXKGVKHVEMPGPFPLGKYPQEGKTREE 567 +SR P+ +P R ++Y KP + P V S D V + E G++Y + GAPFEF+YSYTETP+ KPL +REPA+ PFGP TM RPWTG+ PL FDSF P G KG+K V+ PGPF G P+ ++EE Sbjct: 86 RSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEE 237 The following BLAST results are available for this feature:
BLAST of CX294773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294773 ID=CX294773; Name=CX294773; organism=Citrus clementina; type=EST; length=569bpback to top |