CX294776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLCC_ARATH (Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.537e-28 Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 169 FVWRKKKSHAHRVGGTPVVIKMENPN-WSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTDQPPTSADTHEIQK----LRTRFFYSCIKLF 546 F W K ++ + GTPVV+KMENPN WSMVELE+PS +DFL H QLTWVLLLKAH+AAGCLTS+ SA F+LG+ VRRR+AA RTD +S+ +QK +++ FYSC+K+F Sbjct: 5 FEWWAKGNNNNTRKGTPVVVKMENPNNWSMVELESPSHDDFLVRTHEKSRNKNAR-----QLTWVLLLKAHRAAGCLTSLGSALFALGTAVRRRIAAGRTDIEISSSGVGSLQKQNHTKKSKLFYSCLKVF 130
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSJ (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 196 AHRVGGTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTD 468 A GGTPVV+KM+NPNWS+ E++A E FL Q+TWVLLLKAH+AAGCL +ASA +LG+ RRRVAA RTD Sbjct: 17 AAAAGGTPVVVKMDNPNWSISEIDADGGE-FLAGGRRRGRGKNAK-----QITWVLLLKAHRAAGCLAWLASAAVALGAAARRRVAAGRTD 101
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSI (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica GN=CSLC10 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 196 AHRVGGTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTD 468 A GGTPVV+KM+NPNWS+ E++A E FL Q+TWVLLLKAH+AAGCL +ASA +LG+ RRRVAA RTD Sbjct: 17 AAAAGGTPVVVKMDNPNWSISEIDADGGE-FLAGGRRRGRGKNAK-----QITWVLLLKAHRAAGCLAWLASAAVALGAAARRRVAAGRTD 101
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLC7_ORYSJ (Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.180e-15 Identity = 53/112 (47.32%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 208 GGTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTDQPPTSADTHEIQKLRTRFFYSCIKL 543 GGTPVV+KMENPNWS+ E+EA A Q+TWVLLLKAH+AAG LT ASA ++ S RRRVA+ RTD A E LR R Y CI++ Sbjct: 18 GGTPVVVKMENPNWSISEVEAAEVAPGSPA----GAGKAGRGKNARQITWVLLLKAHRAAGRLTGAASAALAVASAARRRVASGRTD---ADAAPGESTALRAR-SYGCIRV 121
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLC1_ORYSJ (Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13 Identity = 48/105 (45.71%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 211 GTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTD-QPPTSADTHEIQKLRTRF 522 GTPVV+KME+P W++ E+EA + A Q+TWVLLLKAH+AAG LT ASA S+ + RRRVAA RTD +A E LR RF Sbjct: 14 GTPVVVKMESPEWAISEVEAGAAAPGSPAA----GGKAGRGKNARQITWVLLLKAHRAAGKLTGAASAALSVAAAARRRVAAGRTDSDDAAAAPPGESPALRARF 114
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13 Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 211 GTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTDQPPTSADTHEI--QKL-RTRFFYSCIKLF 546 GTPVV+KMENPN+S+VE+E P + F E Q+TWVLLLKAHKA GCLT +A+ F+SL V+RR++ TH + ++L R + +S IKLF Sbjct: 18 GTPVVVKMENPNYSIVEVEEP-DSAFQPMEKSRGKNAK-------QVTWVLLLKAHKAVGCLTWVATVFWSLLGSVKRRLSF-----------THPLGSERLGRDGWLFSAIKLF 113
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13 Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 211 GTPVVIKMENPNWSMVELEAPSEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTDQPPTSADTHEI--QKL-RTRFFYSCIKLF 546 GTPVV+KMENPN+S+VE++ P + F E Q+TWVLLLKAH+A GCLT +A+ F+SL +++R++ TH + +KL R R+ ++ IKLF Sbjct: 18 GTPVVVKMENPNYSVVEIDGP-DSAFRPVEKSRGKNAK-------QVTWVLLLKAHRAVGCLTWLATVFWSLLGAIKKRLSF-----------THPLGSEKLGRDRWLFTAIKLF 113
BLAST of CX294776 vs. ExPASy Swiss-Prot
Match: CSLC3_ORYSJ (Probable xyloglucan glycosyltransferase 3 OS=Oryza sativa subsp. japonica GN=CSLC3 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 142 MAPPSSTESFVWRKKKSHAHRVGGTPVVIKMENPNWSMVELEAP---SEEDFLRAEHHXXXXXXXXXXXXXQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAXRTDQPPTSADTHEIQKLRTRF 522 MAPP +T S W K GTPVV+KM+NP +S+VE++ P + + R ++ QLTWVLLL+AH+A GC+ +A+ F+++ V RRV R A+ + RF Sbjct: 1 MAPPPNTYSESWWGGKEER----GTPVVVKMDNP-YSLVEIDGPGMAAPSEKARGKN------------AKQLTWVLLLRAHRAVGCVAWLAAGFWAVLGAVNRRVRRSRDADAEPDAEASGRGRAMLRF 113 The following BLAST results are available for this feature:
BLAST of CX294776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294776 ID=CX294776; Name=CX294776; organism=Citrus clementina; type=EST; length=547bpback to top |