CX294789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.850e-23 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 202 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 591 D+ T++C +C + IP N +H HC RN+ C +C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH++ CG RTELC C R + +++ H C Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.348e-23 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 202 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 606 D+ ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH++ CG RTELC C R + ++E H + C V E Sbjct: 7 DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQTHPAVCGRVEE 140
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.348e-23 Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 202 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 591 D+ T++C +C + IP N +H HC RN+ C C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH++ CG RTELC C R + +++ H C Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.291e-23 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 202 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 606 D+ +++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH++ CG RTELC C R + ++E H C V E Sbjct: 7 DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELKTHPEVCGRVEE 140
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.847e-22 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 199 SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 591 +D+ T++C +C + IP N +H HC RN+ C VC + P+ E H H V C +C++ +E+ L H+ +CP R+ C C+ L + L +H++ CG RTELC C R + +++ H C Sbjct: 6 NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVLVKDLKTHPEVC 135
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.019e-22 Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 217 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 591 +C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M++ L HK +C +R V C FC+ + L H+ CG+RTELC C ++I R H C Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQHRDVC 131
BLAST of CX294789 vs. ExPASy Swiss-Prot
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 214 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFP--LPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 591 ++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C +++ + L H+ ++C +R V C FC+ L VDL EH CG +TELC C +++ LR H C Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH--CGQQTELCPDCGQHVMLRVLARHREEC 131 The following BLAST results are available for this feature:
BLAST of CX294789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294789 ID=CX294789; Name=CX294789; organism=Citrus clementina; type=EST; length=645bpback to top |