CX294795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294795 vs. ExPASy Swiss-Prot
Match: RN160_MOUSE (RING finger protein 160 OS=Mus musculus GN=Rnf160 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.416e-40 Identity = 68/135 (50.37%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 69 SANEVVATYTKDETKMDLIIRLPASYPLRPVDVECMRSLGISEVKQRKWLMSMMLFVRNQNGALAEAIRIWKRNFDKEFEGVEECPICYSVIHTANHSLPRLACKTCKHKFHSACLYKWFSTSHKSSCPLCQSPF 473 + EV+ATYT ++ ++LII+LP++YPL + VE + +G++ + R W++ + ++ +QNG++ E + +WK N DK FEGVE+C IC+SVIH N+SLP+ AC+TCK KFHSACLYKWF++S+KS+CPLC+ F Sbjct: 1632 TTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRIGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1766
BLAST of CX294795 vs. ExPASy Swiss-Prot
Match: RN160_HUMAN (RING finger protein 160 OS=Homo sapiens GN=RNF160 PE=1 SV=5) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 68/135 (50.37%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 69 SANEVVATYTKDETKMDLIIRLPASYPLRPVDVECMRSLGISEVKQRKWLMSMMLFVRNQNGALAEAIRIWKRNFDKEFEGVEECPICYSVIHTANHSLPRLACKTCKHKFHSACLYKWFSTSHKSSCPLCQSPF 473 + EV+ATYT ++ ++LII+LP++YPL + VE + +G++ + R W++ + ++ +QNG++ E + +WK N DK FEGVE+C IC+SVIH N+SLP+ AC+TCK KFHSACLYKWF++S+KS+CPLC+ F Sbjct: 1631 TTREVMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1765
BLAST of CX294795 vs. ExPASy Swiss-Prot
Match: YO89_SCHPO (Uncharacterized RING finger protein C21D10.09c OS=Schizosaccharomyces pombe GN=SPBC21D10.09c PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 59/141 (41.84%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 51 SLTVSKSANEVVATYTKDETKMDLIIRLPASYPLRPVDVECMRSLGISEVKQRKWLMSMMLFVRNQNGALAEAIRIWKRNFDKEFEGVEECPICYSVIHTANHSLPRLACKTCKHKFHSACLYKWFSTSHKSSCPLCQSPF 473 ++ V+++ E+ Y DE K+++ I++P+ YPL+ V VE + +G++E + R W+++ + +QNG++ +A+ + K+N FEGVEEC ICYSV+ + +LP C TC+HKFH++CLYKWF +S+ S CPLC+S F Sbjct: 1468 NVKVNRNTREISFIYNVDEHKLEMAIKIPSVYPLQNVQVEGIERVGVNERQWRSWILASQSILSSQNGSITDALLVLKKNISMHFEGVEECAICYSVL-SVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSRCPLCRSSF 1607
BLAST of CX294795 vs. ExPASy Swiss-Prot
Match: YM81_YEAST (RING finger protein YMR247C OS=Saccharomyces cerevisiae GN=YMR247C PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32 Identity = 57/143 (39.86%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 39 DENFSLTVSKSANEVVATYTKDETKMDLIIRLPASYPLRPVDVECMRSLGISEVKQRKWLMSMMLFVRNQNGALAEAIRIWKRNFDKEFEGVEECPICYSVIHTANHSLPRLACKTCKHKFHSACLYKWFSTSHKSSCPLCQS 467 D+ ++ ++ NEV A+Y D+ K+++ +LP +YPL + V + +GISE K ++W+MS + NG++ +++ ++ +N +F G EEC ICYS++H + LP C TCK+KFH ACLYKWF +S ++CPLC+S Sbjct: 1414 DDALTIKLNNITNEVKASYLIDDQKLEISFKLPKNYPLTNIQVNGVSRVGISEQKWKQWIMSTQHVITGMNGSVLDSLELFTKNVHLQFSGFEECAICYSILHAVDRKLPSKTCPTCKNKFHGACLYKWFRSSGNNTCPLCRS 1556 The following BLAST results are available for this feature:
BLAST of CX294795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294795 ID=CX294795; Name=CX294795; organism=Citrus clementina; type=EST; length=653bpback to top |