CX294799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP414_ARATH (Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E102 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30 Identity = 61/108 (56.48%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 275 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +SD + H+VFDE+P+L+V+SAT +IGRF K+ + EA F R+L L IRP+EFTFG+VI SST D+ LGKQLH +A K+GL SNVFVGSA+L+ Y+KLS++ + Sbjct: 39 DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTD 146
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.466e-17 Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 245 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +RT + + D +V DE+P+ NVVS T +I R+++ H EA+ +F+ M+ + +P+EFTF +V+ S L LGKQ+H K S++FVGS++LD+Y K I+E Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 36/102 (35.29%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 293 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 SV +VF+ +P +VVS TII +A+ YE+A+ + M +++P FT SV+P + D+ GK++H + + G+ S+V++GS+++D+Y K + IE+ Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295 HSP 2 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 36/117 (30.77%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 245 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 I + V ++S + +VF + + +S +++ + + Y EA+ LF +M+ ++P F SVIP+ L L+LGKQLH + + G SN+F+ SA++D+Y K +I+ Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 290 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 + HQ+FD++P NV+S TT+I ++K +++A+ L ML N+RP+ +T+ SV+ S + D+ + LH K GL+S+VFV SA++D++ KL E+ Sbjct: 113 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.883e-14 Identity = 37/107 (34.58%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 278 SDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 + + S VF+++P NVVS T +I + K +EA LF RM + +++P+EFT +++ +ST L L++G+ +H +A K G + F+G+A++D+Y K S+++ Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQD 304
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13 Identity = 34/103 (33.01%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 290 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +S +VFDE+P+ NV+ +I + Y E + +F M N+RP +TF V+ + + + +G+++H ATKVGL S +FVG+ ++ +Y K + E Sbjct: 91 ASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSE 193
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP430_ARATH (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13 Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 230 LETPAIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 LE + + +S ++D + ++FDE+ V + T +I F K + A+ LF M+ P+EFTF SV+ S L D++ G ++H K G + N VGS++ DLY K +E Sbjct: 55 LENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE 177 HSP 2 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 33/117 (28.21%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 245 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 ++T V S+ K +V + + +V T+++ F + +EA+ F M L ++P+ FT+ +++ +A+ L+ GKQ+H+ KVG + + VG+A++D+Y+K S+ E Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.673e-13 Identity = 35/101 (34.65%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 293 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 + ++FDE+P +VVS +I +A+ +Y+EA+ LF M+ N+RP E T +V+ + + LG+Q+H W G SN+ + +A++DLY K +E Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 37/111 (33.33%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 266 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 CGS D +VFD +P+ N+VS T++I +++ EAI L+ +ML ++ P +F FGS+I + + D+ LGKQLHA K+ S++ +A++ +Y++ + + + Sbjct: 115 CGSLRD----AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-12 Identity = 35/103 (33.98%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 290 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +S ++VFD++P+ ++V+ ++I FA+ EEA+ L++ M I+P FT S++ + + L LGK++H + KVGL N+ + +LDLY + +EE Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275 The following BLAST results are available for this feature:
BLAST of CX294799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294799 ID=CX294799; Name=CX294799; organism=Citrus clementina; type=EST; length=600bpback to top |