CX294800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.559e-25 Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK R GAG+PPYELLLP+S GVTGRGIPNSISI Sbjct: 834 HSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HSPDEEY+G+ Q S W D E+++ F FSA + IEK I+ RN+D + RCGAG+ PYEL+ PSS PGVT RG+PNS+SI Sbjct: 844 HSPDEEYIGE-RQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19 Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 23 AHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 +HSPDEEY+G+ + W+ +P V F+KFS L+E E I+ RN + K RCGAGI PYELL P S PGVTGRGIPNSISI Sbjct: 814 SHSPDEEYMGEYAE--PAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HSPDEEY+G+ Q S W D E++ F F+A + IEK I RN D + RCGAG+ PYELL+PSS PGVT RG+PNS+SI Sbjct: 837 HSPDEEYIGE-RQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18 Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 23 AHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 +HS DEEYLG + W +D V +D F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 842 SHSTDEEYLG--GEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.947e-17 Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HS DEEYLG + W +D V + F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 860 HSTDEEYLG--GEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.312e-16 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HSPDEEY+G+ Q + W N+P + F++F L+ +E +I+ RN + LK R GAG+ YELL P+S GVTG G+P SISI Sbjct: 815 HSPDEEYIGE--QQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HS DEEYLG+ + W DP L +F+A++ E+ I RN D + RCGAG+ PYEL+ PSSGPG+T RG+PNS++I Sbjct: 818 HSADEEYLGE--RPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/85 (51.76%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHS-HWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HSPDEEYLG+ W D + F+A++ E+ I RN D K RCGAG+ PYELL PSS PGVT RG+PNSISI Sbjct: 834 HSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
BLAST of CX294800 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15 Identity = 45/84 (53.57%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 26 HSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 277 HS DE YLGQ + W + E L F+KF ++EIEK I+ RN D LK R G PY LL PSS GVTGRGIPNS+SI Sbjct: 778 HSSDEVYLGQRDS--KEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859 The following BLAST results are available for this feature:
BLAST of CX294800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294800 ID=CX294800; Name=CX294800; organism=Citrus clementina; type=EST; length=542bpback to top |