CX294825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 6.110e-106 Identity = 181/213 (84.98%), Postives = 196/213 (92.02%), Query Frame = 2 Query: 2 IKTVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLFHS 640 IKT+HLYTLNMEKSAL IL+NLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSY+SRT+GWDQYP GRWGDSRNPSYGAL+D+QF RPR R KKL EEWAVP+KSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL KIN KGFLTINSQPAVNGERSDS+SVGWGGPGGYVYQKAYLEFFCS EK+ L++KSK F S Sbjct: 279 IKTLHLYTLNMEKSALGILMNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVEDINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPS 491
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 5.353e-102 Identity = 173/213 (81.22%), Postives = 190/213 (89.20%), Query Frame = 2 Query: 2 IKTVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLFHS 640 IKT+HLYTLNM+KSA+ IL+NLGLIEESK+SR LPWRP TNVFRVKEDVRPIFWANRPKSYL RT+GWDQYP GRWGDSRNPSYGAL+DHQF RPR R KKL EEWAVPLKSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL IN KGFLTINSQPAVNGE+SDS +VGWGGPGGYVYQKAYLEFFC+ EK+ L++K K F S Sbjct: 279 IKTLHLYTLNMDKSAIGILMNLGLIEESKVSRPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRPRGRGKKLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPS 491
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 358.992 bits (920), Expect = 1.234e-98 Identity = 168/213 (78.87%), Postives = 189/213 (88.73%), Query Frame = 2 Query: 2 IKTVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLFHS 640 +K++HLYTLNMEKSALAIL+NLG+I+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P+GRWGDSR+ SYGALSDHQF RPR+RDKKL +EW VPLKSVEDI EKFK CLG L+SSPWSELDGLQPET+IINEQL K+N KGFLTINSQP+VN ERSDS +VGWGGP GYVYQKAYLEFFCS EK+ A+V+K K S Sbjct: 279 VKSLHLYTLNMEKSALAILMNLGMIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQFSRPRARDKKLQQEWVVPLKSVEDIQEKFKELCLGNLKSSPWSELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGYVYQKAYLEFFCSKEKLDAVVEKCKALPS 491
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.412e-94 Identity = 157/213 (73.71%), Postives = 183/213 (85.92%), Query Frame = 2 Query: 2 IKTVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLFHS 640 I ++HLYTLN++KSA+ IL+NLGLI+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P GRWGDS + +Y LSD+QF RP+ RDKKL +EW VPLKS+ED+ EKFK C+G L+SSPWSELDGLQPETKIINEQLGKIN GFLTINSQP+VN +SDS ++GWGGPGGYVYQKAYLEFFCS +K+ LV+KSK F S Sbjct: 279 ITSLHLYTLNVDKSAIGILMNLGLIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHGRWGDSHSAAYSTLSDYQFARPKGRDKKLQQEWVVPLKSIEDVQEKFKELCIGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGYVYQKAYLEFFCSKDKLDTLVEKSKAFPS 491
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.015e-45 Identity = 95/218 (43.58%), Postives = 138/218 (63.30%), Query Frame = 2 Query: 11 VHLYTLNMEKSALAILLNLGL-IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLF 634 +H YTLN E + + +L LGL IE+ + R LPW + R EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E +++ F ++ G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E V AL+ K + Sbjct: 317 LHFYTLNREVATIEVLKRLGLWIEDPR--RPLPWALSAHPKRRVEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFQVFAHHLSGEPNQNGYKVTCLPWND-EPLAAETSLMKEELLRVNRRGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKKY 531
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.856e-45 Identity = 93/217 (42.86%), Postives = 135/217 (62.21%), Query Frame = 2 Query: 11 VHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLF 634 +H YTLN E + + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F++Y G ++ PW++ + L ET ++ E+L ++N G LTINSQP +N + S VGWG GGYV+QKAYLEFF S E V AL+ K + Sbjct: 317 LHFYTLNREVATMEVLKQLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSEESVFEVFEHYLSGEPNRHGYRVTCLPWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKTY 531
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.026e-44 Identity = 94/217 (43.32%), Postives = 133/217 (61.29%), Query Frame = 2 Query: 11 VHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLF 634 +H YTLN E + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + Sbjct: 318 LHFYTLNREMATTEVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKY 532
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.985e-44 Identity = 94/217 (43.32%), Postives = 132/217 (60.83%), Query Frame = 2 Query: 11 VHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLF 634 +H YTLN E + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S + L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + Sbjct: 318 LHFYTLNREMATTEVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPRELLLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKY 532
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.615e-40 Identity = 92/222 (41.44%), Postives = 126/222 (56.76%), Query Frame = 2 Query: 2 IKTVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVF---------RVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALVDKSKLFHS 640 I +H YT+N+EK+ I+ LGL++E+ P NV R+ E VRPIFW R +SY+SRT WD+ P GRWGDSR+P++G ++ R K++ W P KS +I + F YC K+ S PWS+L + E +I +QL +N FLTINSQPA+NGE+S GWG P GYV+QK Y+EFF P + L + K +S Sbjct: 270 ITRLHFYTMNLEKAVKMIIERLGLLDENLA----PIVDTNNVELTNASSQDRRINEGVRPIFWRTRNESYVSRTDQWDELPHGRWGDSRSPAFGEFDAIRYGL-RMSPKEITTSWGSP-KSYSEIGDLFARYCEKKISSLPWSDLP-ISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGYVFQKPYVEFFVHPSLLNELKETVKKLNS 484
BLAST of CX294825 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.695e-39 Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 2 Query: 8 TVHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPT-NVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMR---PRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELD-GLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKVTALV 616 ++HLYT+N E S IL +LGL + R PW+ + + R E VRPI+W+ RP+SY++RT WDQ+P GRWG+S +P++G +S + R+ D +L + ++S ED+ F NY K+ PW+E + G+QPET +I+EQL N G LT+NSQP+VNG S VGWG PGGY YQKAYLE F + E L+ Sbjct: 330 SIHLYTMNREGSIREILKSLGLWKLEG-DRVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFPNGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRL-AMFGANIESFEDVKRVFINYITQAPNADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWGKPGGYCYQKAYLECFMTAELSDKLI 542 The following BLAST results are available for this feature:
BLAST of CX294825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294825 ID=CX294825; Name=CX294825; organism=Citrus clementina; type=EST; length=653bpback to top |