CX294845

Overview
NameCX294845
Unique NameCX294845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length632
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294845 vs. ExPASy Swiss-Prot
Match: PPA16_ARATH (Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.043e-62
Identity = 109/166 (65.66%), Postives = 133/166 (80.12%), Query Frame = 2 
Query:  107 EEECDFRGTHRIELMKKEI-DYNVLSHSKNGPKDLWPSISNYVLQVSSSHDRQMAVAYMYFLDSGGGSYPEVISSAQAEWFRHKAEEINPDSRVPEIVFWHIPSKAYKKVAPWFGVHKPCVGSINKESVAAQEAEMGIMKILVKRTSVKAVFVGHNHGLDWCCPYQ 601
            ++ C FRGT R+EL+++EI   N LS+S   PK+LWPS+SNYVL V SS   +  VA +YFLDSGGGSYPEVIS+AQ EWF+ K+  +NP  R+PE++FWHIPSKAYKKVAP   + KPCVGSINKE V AQEAE G+M++L  R+SVKAVFVGHNHGLDWCCPY+
Sbjct:  147 DDGCTFRGTTRVELIQEEIKSSNALSYSMISPKELWPSVSNYVLLVESSDHSKPPVALLYFLDSGGGSYPEVISNAQVEWFKTKSNTLNPYLRIPELIFWHIPSKAYKKVAPRLWITKPCVGSINKEKVVAQEAENGMMRVLENRSSVKAVFVGHNHGLDWCCPYK 312

HSP 2 Score: 26.1794 bits (56), Expect = 1.043e-62
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 
Query:  604 LWLCFARHT 630
            LWLCFARHT
Sbjct:  315 LWLCFARHT 323

HSP 3 Score: 22.3274 bits (46), Expect = 1.043e-62
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3 
Query:    6 SDSGIPQLFCPAVN 47
            S SGIP L CPA +
Sbjct:  132 SSSGIPPLRCPAAS 145
The following BLAST results are available for this feature:
BLAST of CX294845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PPA16_ARATH1.043e-6265.66Probable inactive purple acid phosphatase 16 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC05056F06SK PhIFruit1 Citrus clementina cDNA clone C05056F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294845 ID=CX294845; Name=CX294845; organism=Citrus clementina; type=EST; length=632bp
GGTTTTCAGACTCTGGAATTCCTCAACTTTTTTGCCCTGCAGTGAATTCG
TCATATTCAGATTGATACTAGATTCTCCTAAGCGGGTCAAAATTTCCATG
CCAGGGGAAGAAGAGTGTGATTTTAGAGGCACACATCGTATAGAGCTGAT
GAAGAAAGAGATAGATTATAATGTGCTATCACATTCTAAAAATGGTCCTA
AAGATCTTTGGCCGAGTATCTCCAACTATGTTCTCCAAGTCTCATCATCA
CATGATCGACAGATGGCTGTGGCTTATATGTATTTTCTAGATTCTGGCGG
TGGCTCCTACCCTGAAGTCATATCAAGTGCCCAAGCAGAATGGTTCCGAC
ATAAAGCTGAGGAGATCAATCCTGATTCAAGGGTTCCTGAGATCGTTTTT
TGGCATATACCAAGTAAAGCTTATAAGAAGGTAGCTCCGTGGTTTGGAGT
TCACAAGCCTTGTGTGGGTTCCATTAATAAGGAAAGTGTTGCTGCTCAAG
AAGCTGAAATGGGTATAATGAAAATTCTTGTCAAAAGAACTTCTGTCAAG
GCAGTGTTTGTTGGACACAACCACGGATTGGACTGGTGCTGCCCCTATCA
AATCTATGGCTCTGCTTTGCTAGACATACTGG
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