CX294847

Overview
NameCX294847
Unique NameCX294847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig886 contig Ccv1_Contig886:19..641. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294847 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.213e-21
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 1
Query:   82 PLLGISSNS-EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGV 573
            PLL  + ++  PVLDI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGI 193          
BLAST of CX294847 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 1
Query:  106 SEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIG 570
            + PVLD  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIG 184          
BLAST of CX294847 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  109 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPRRCNKIGV 573
            +P++DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS   +    CN + +
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCNNVDI 158          
BLAST of CX294847 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 1
Query:  100 SNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG-TNGQ-CPLDVIQLSSPSERGDNLRLL-PYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWK-VDSYDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVS 576
            S++E V DI G  V    EY ++  + GAGG     G T G  CP+ +IQ  S  + G  +R   P ++   +   T++ + F   V    C E   W  V    +  +  GGSE HP  E +  +FKIEK G+ +    Y +V CP    S    C+ IG++
Sbjct:    1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF---VEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGSLA----YKLVFCPK---SSSGSCSDIGIN 153          
The following BLAST results are available for this feature:
BLAST of CX294847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MIRA_RICDU3.213e-2136.72Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC4.196e-2137.0421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
LSPI_CARPA2.726e-1231.71Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE6.715e-1131.90Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC05056F08SK PhIFruit1 Citrus clementina cDNA clone C05056F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294847 ID=CX294847; Name=CX294847; organism=Citrus clementina; type=EST; length=622bp
AGCCAGCCTTCCAGTGGCAAAAAAATGAAGACTTCATTGATAACAACACT
CTCCTTCCTTATCCTTACCTTGGCCACGCAGCCTCTATTGGGCATCTCAT
CAAACTCTGAACCTGTCTTAGATATCATTGGCAACAAGGTCAAATCCACC
CTCGAGTATAAACTTATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCAC
ACACCTAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTT
CTCCTAGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAATTAC
AAAATTGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAAAAGT
TTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGCTATG
ACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCCACCCAGGAGCTGAA
ACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCATATGG
TGGTGTATACAATATTGTCCATTGTCCGAGTGTCTGTCTATCTTGTCCTA
GACGCTGCAACAAAATTGGCGTTTCACTAAGGATGGCGTTCGACGTCTGC
TTCTAGTTGGTGATCATGAACC
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