CX294859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_SPIOL (Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea GN=RPE PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.235e-80 Identity = 153/189 (80.95%), Postives = 167/189 (88.36%), Query Frame = 2 Query: 86 MSTGSLCSST--TQINGFTGGFMLQKT--NLNQPSSLSFTRGRIHTIVKASARVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 MS SLC ST +QINGF GG ++K + + P+SL+FTR ++ T+VKA++RVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCE +STIHLHRT+NQIK LGAKAGVVL P T LS IE VL Sbjct: 1 MSAASLCQSTLQSQINGFCGGLNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTPLSTIEYVL 189
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_SOLTU (Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.327e-78 Identity = 147/184 (79.89%), Postives = 162/184 (88.04%), Query Frame = 2 Query: 89 STGSLCSSTTQINGFTGGFMLQKTNLNQPSSLSFTRGRIHTIVKASARVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 S GS +QI+GF G LQK + + P+SL+FTR RI T+V AS+RVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPLVVD+LRP+TDLPLDVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIK LGAKAGVVL P T L+AIE VL Sbjct: 1 SLGSSTLLQSQISGFGGSQKLQKISFSNPNSLTFTRRRIQTVVNASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVL 184
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_ORYSJ (Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=RPE PE=1 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 1.975e-69 Identity = 133/153 (86.93%), Postives = 143/153 (93.46%), Query Frame = 2 Query: 182 LSFTRGRIHTIVKASARVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 L+F+ R V+AS+RVDKFSK+DIIVSPSILSANF+KLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIK LGAKAGVVL PAT L+AI+ VL Sbjct: 26 LAFSSPRKAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATPLTAIDYVL 178
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_SYNY3 (Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803) GN=rpe PE=1 SV=3) HSP 1 Score: 184.496 bits (467), Expect = 4.007e-46 Identity = 89/129 (68.99%), Postives = 110/129 (85.27%), Query Frame = 2 Query: 254 DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPL+VDA+RP+T LDVHLMIVEPE+ V DF KAGADI+SVH E +++ HLHRTL QI++LG KAG VL P+T L +E VL Sbjct: 4 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVL 132
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_BACSU (Ribulose-phosphate 3-epimerase OS=Bacillus subtilis GN=rpe PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.248e-39 Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 2 Query: 257 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECV 637 I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPL+V+A+RPVTDLPLDVHLMI EP++ +P F KAGADI+SVH E + HLHRT+ IK+ G KAGVVL P T + IE V Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLPLDVHLMIEEPDRYIPAFAKAGADILSVHAE--ACPHLHRTIQLIKEQGVKAGVVLNPHTPVQVIEHV 126
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPEC_RALEH (Ribulose-phosphate 3-epimerase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbEC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.135e-31 Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 245 SKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPLV +A+RP+ +P+DVHLM+ + +P F KAGA+I+S H E S H+ RT+ I+D G KAG+VL PAT L ++ L Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVSIPIDVHLMVEPVDALIPLFAKAGANIISFHPEASR--HVDRTIGLIRDHGCKAGLVLNPATPLGWLDHTL 141
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPEP_RALEH (Ribulose-phosphate 3-epimerase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbEP PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.111e-31 Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 245 SKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPLV +A+RP+ +P+DVHLM+ + +P F KAGA+++S H E S H+ RT+ I+D G KAG+VL PAT LS ++ L Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPLVSIPIDVHLMVEPVDALIPMFAKAGANLISFHPEASR--HVDRTIGLIRDHGCKAGLVLNPATPLSWLDHTL 141
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_AQUAE (Ribulose-phosphate 3-epimerase OS=Aquifex aeolicus GN=rpe PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.171e-29 Identity = 64/124 (51.61%), Postives = 89/124 (71.77%), Query Frame = 2 Query: 260 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIE 631 +++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G ++ +R LP+D HLMI P++ +P F++AGA+ +SVH E + H+HRTL IK+LGAKAGVV+ P TSLSAIE Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPIDAHLMIENPDKYIPKFVEAGANWISVHIE--NNYHIHRTLQLIKELGAKAGVVVNPGTSLSAIE 124
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_BUCAP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpe PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.592e-29 Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 263 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 ++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+++ ALR +P+DVHLM+ + +P F +AGAD ++ H E ST H+ RTLN IK+ G KAG+ L PATSL+ ++ V+ Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPIDVHLMVKPVDNLIPQFAEAGADFITFHPE--STDHIDRTLNLIKECGCKAGLALNPATSLNFLDYVM 130
BLAST of CX294859 vs. ExPASy Swiss-Prot
Match: RPE_RHOCA (Ribulose-phosphate 3-epimerase OS=Rhodobacter capsulatus GN=cbbE PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 8.394e-28 Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 2 Query: 257 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLKPATSLSAIECVL 640 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R +DVHLMI + + + +AGAD+++ H E H+HRTL I+ G K+GV + P T AIE VL Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGP--HIHRTLQAIRAAGMKSGVAINPGTPAEAIEHVL 132 The following BLAST results are available for this feature:
BLAST of CX294859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294859 ID=CX294859; Name=CX294859; organism=Citrus clementina; type=EST; length=641bpback to top |