CX294861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.547e-63 Identity = 122/178 (68.54%), Postives = 148/178 (83.15%), Query Frame = 2 Query: 119 GDRKIPQFRQWSPVQVKALPRPSVELKRRWNSSFASSGI-RAQVATIEQATNEAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 G R+I Q RQWSP+Q A+P + L+ SFA+S + +AQ +EQ+T EA KVE+PV VVTGASRGIG+A+A+SLGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNA ITRDTLL+RMKK W +VIDLNLTGVFLCTQ Sbjct: 20 GFREIRQVRQWSPLQ-SAMPHFGM-LRCGSRQSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 195 HSP 2 Score: 24.6386 bits (52), Expect = 3.547e-63 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKK++G Sbjct: 190 VFLCTQAATKIMMKKRKG 207
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 6.570e-62 Identity = 118/145 (81.38%), Postives = 129/145 (88.97%), Query Frame = 2 Query: 215 SFASSGIRAQVATIEQATNEAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 S A+SGIRAQVAT E+ + A Q VE+PV +VTGASRGIG+A+A+SLGKAGCKVLVNYARSSKEAEEV KEIE GGQALTFGGDVSKE DVE+MIKTAVDAWGTVDIL+NNA ITRD LLMRMKK WQ+VIDLNLTGVFLCTQ Sbjct: 51 SIATSGIRAQVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQ 195 HSP 2 Score: 25.7942 bits (55), Expect = 6.570e-62 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKKK+G Sbjct: 190 VFLCTQAAAKIMMKKKKG 207
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 8.568e-62 Identity = 119/178 (66.85%), Postives = 145/178 (81.46%), Query Frame = 2 Query: 119 GDRKIPQFRQWSPVQVKALPRPSVELKRRWNSSFASSGI-RAQVATIEQATNEAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 G R+I Q RQW+P+Q ++P SFA+S + +AQ +EQ+T EA KVE+PV VVTGASRGIG+A+A+SLGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNA ITRDTLL+RMKK W +VIDLNLTGVFLCTQ Sbjct: 20 GFREIRQVRQWTPLQ-SSMPHFGSR------QSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 190 HSP 2 Score: 24.6386 bits (52), Expect = 8.568e-62 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKK++G Sbjct: 185 VFLCTQAATKIMMKKRKG 202
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.794e-60 Identity = 115/177 (64.97%), Postives = 139/177 (78.53%), Query Frame = 2 Query: 119 GDRKIPQFRQWSPVQVKALPRPSVELKRRWNSSFASSGIRAQVATIEQATNEAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 G R+I Q RQW+P++ P + R S+ + +AQ EQ T EA KVE+PV VVTGASRGIG+A+A+SLGKAGCKVLVNYARS+KEAEEV K+IE GG+A+TFGGDVSKEADV+SM+KTAVD WGT+D+++NNA ITRDTLL+RMKK W +VIDLNLTGVFLCTQ Sbjct: 19 GYREICQVRQWAPLKSAM---PHFGMLRCATSTVVKAQAQAQATATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGGDVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 192 HSP 2 Score: 24.6386 bits (52), Expect = 7.794e-60 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKK++G Sbjct: 187 VFLCTQAATKIMMKKRKG 204
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.204e-57 Identity = 118/185 (63.78%), Postives = 142/185 (76.76%), Query Frame = 2 Query: 119 GDRKIPQFRQWSPVQVKALPRPSVELKRRWNSS-FASSG-----IRAQVATIEQATNE--AAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 G R+I RQW+PV P P + R + FA+S +AQ EQ+T E A KVE+PV VVTGASRGIG+A+A+SLGKAGCKVLVNYARS+KEAE+V K+IE GGQA+TFGGDVSKEADV++M+KTAVDAWGT+D+++NNA ITRDTLL+RMKK W +VIDLNLTGVFLCTQ Sbjct: 22 GYREICHVRQWAPVHS---PMPHFGMLRCGSRRPFATSSSTVVQAQAQATAAEQSTGEEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITFGGDVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 203 HSP 2 Score: 24.6386 bits (52), Expect = 1.204e-57 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKK++G Sbjct: 198 VFLCTQAATKIMMKKRKG 215
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 2.668e-57 Identity = 109/177 (61.58%), Postives = 140/177 (79.10%), Query Frame = 2 Query: 119 GDRKIPQFRQWSPVQVKALPRPSVELKRRWNSSFASSGIRAQVATIEQATNEAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 G R+I Q RQ +P+ A+P + L+ R F++S ++AQ EQ+ E QKVE+PV V+TGASRGIG+A+A++LGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSK DV++M+KTA+D WGT+D+++NNA ITRDTLL+RMK+ W +VI LNLTGVFLCTQ Sbjct: 20 GFREISQIRQLAPLH-SAIPHFGM-LRCRSRQPFSTSVVKAQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQ 194 HSP 2 Score: 25.7942 bits (55), Expect = 2.668e-57 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++ +IMMKKKRG Sbjct: 189 VFLCTQAAVKIMMKKKRG 206
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 3.071e-49 Identity = 94/126 (74.60%), Postives = 112/126 (88.89%), Query Frame = 2 Query: 272 EAAQKVEAPVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 EA KVE+PV VVTGASRGIG+A+A+SLGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSKEADV++M+KTAVD WGT+D+++NNA DTLL+RMKK W +V+DLNLTGVFLC+Q Sbjct: 7 EAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGGDVSKEADVDAMMKTAVDKWGTIDVVVNNAG---DTLLIRMKKSQWDEVMDLNLTGVFLCSQ 129 HSP 2 Score: 23.8682 bits (50), Expect = 3.071e-49 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 630 VYSCVHSSSQIMMKKKRG 683 V+ C ++++IMMKK++G Sbjct: 124 VFLCSQAATKIMMKKRKG 141
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31 Identity = 67/119 (56.30%), Postives = 89/119 (74.79%), Query Frame = 2 Query: 293 APVAVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 A VA+VTGASRGIG+A A++L G KV+VNYA+SS A+ V EI +GG+A+ +V+ +V+ +IKT +D + +D+L+NNA ITRDTLL+RMK WQ VIDLNLTGVFLCT+ Sbjct: 6 AQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCTK 124
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 61/116 (52.59%), Postives = 84/116 (72.41%), Query Frame = 2 Query: 302 AVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQ 649 A+VTGASRGIGR++A+ L K+G V+VNY+ + +A EV EI+ G +A+ DVS DV++MIK + + T+DIL+NNA ITRD L+MRMK+ W DVI++NL GVF CT+ Sbjct: 7 AIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTK 122
BLAST of CX294861 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 302 AVVTGASRGIGRAVAMSLGKAGCKVLVNYARSSKEAEEVCKEIEGSGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAXITRDTLLMRMKKVTWQDVIDLNLTGVFLCTQQ 652 A+VTGASRGIGR++A+ L + G V VNYA S +AE V +EI+ G ++ +V+K +V+ MIK V +G+VD+L+NNA IT+D LLMRMK+ W DVID NL GVF C Q+ Sbjct: 5 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 121 The following BLAST results are available for this feature:
BLAST of CX294861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294861 ID=CX294861; Name=CX294861; organism=Citrus clementina; type=EST; length=688bpback to top |