CX294865

Overview
NameCX294865
Unique NameCX294865
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length448
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig941 contig Ccv1_Contig941:435..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX294865 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.131e-12
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 3 
Query:    6 QQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 152
            QQ+MNLM G S YE+   Q FD R+Y Q+N LQP NHY RQDQ ALQLV
Sbjct:  194 QQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242
The following BLAST results are available for this feature:
BLAST of CX294865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AG_PANGI6.131e-1265.31Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
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Properties
Property NameValue
Genbank descriptionC05056H02SK PhIFruit1 Citrus clementina cDNA clone C05056H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294865 ID=CX294865; Name=CX294865; organism=Citrus clementina; type=EST; length=448bp
GAGGACAGCAGAACATGAATTTGATGCAAGGAGGGAGTAGCTACGAGATT
ATACAGTCTCAGCCATTTGATTCCCGGAGCTATTTCCAAGTCAATGCATT
ACAGCCCACCAATCATTACCCACGCCAGGATCAGATGGCCCTTCAGTTAG
TTTAATATGTTTGAAGAATATTCTGCCGTGTCATATCCTATGGAGGGTAT
CTAGCTATTACTTCATTCTAGATAAAAGGTGTGCAGGTGCGCGCTCAAAA
TTGCTATAAGATGCAGCGAAGAAATCAACTTTGCTTAATTAAGTGATCAT
CAGGGGCCTAAGCTAGTAGCTATATAAACTATTTTAAGACTCATAAATAT
TATATATATGTTTGTCAGCCATGAAATTCATATTCTGTATGCGTAATGCA
AACACAAAGTCTCTGCATTTGATATTAATTTCGAATATGATATTAATG
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