CX294887

Overview
NameCX294887
Unique NameCX294887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX294887_ssr239 microsatellite CX294887_ssr239:239..250. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15047 contig Ccv1_Contig15047:1..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.395e-83
Identity = 152/180 (84.44%), Postives = 161/180 (89.44%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSPD +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVEDVKK+PEAATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DD
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDD 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.435e-82
Identity = 149/178 (83.71%), Postives = 159/178 (89.33%), Query Frame = 1
Query:  103 VSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            VSKLRGK+              NWLQVGDDLNHRNLSD AKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAARVVEDVKK+PE+ATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DD
Sbjct:   23 VSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDD 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 7.653e-82
Identity = 151/180 (83.89%), Postives = 158/180 (87.78%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I VSKLRGKR              NWLQVGDDLN R L++L+KK+GDV LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDP+AAT GIVLRRRLQL+MYNNMYRIMFDRRFES DD
Sbjct:   21 IAVSKLRGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDD 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 9.996e-82
Identity = 149/180 (82.78%), Postives = 161/180 (89.44%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+LLLRMGQRNLVVVSSP+ +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVEDVKK+P AAT+GIVLRRRLQLMMYNNMYRIMFDRRFES++D
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEED 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.596e-79
Identity = 146/180 (81.11%), Postives = 155/180 (86.11%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            IT+SKLRGK+              NWLQVGDDLN RNL D AKK+GD+ +LRMGQRNLVVVSSP+ AK+VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQ RF WEDEAARVVEDVK +PEAATNGIVLR RLQL+MYNNMYRIMFDRRFES DD
Sbjct:   22 ITISKLRGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRFESVDD 201          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.596e-79
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I +SKLRGK+              NWLQVGDDLNHRNL+DLAK++G++LLLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE EAA VV+DVKK+P AAT GIV+RRRLQLMMYNNM+RIMFDRRFES+DD
Sbjct:   21 ILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRRFESEDD 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.596e-79
Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I +SKLRG+R              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ RF WE EAA VV+DV+++P+AA  GIVLRRRLQLMMYNNMYRIMFDRRFES++D
Sbjct:   21 IAISKLRGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEED 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.034e-78
Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I +SKLRGKR              NWLQVGDDLNHRNL+DLAKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+DVKK+P+AAT G+V+R+RLQLMMYNNM+RIMFDRRFES+DD
Sbjct:   21 IFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDD 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.764e-78
Identity = 143/180 (79.44%), Postives = 155/180 (86.11%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I VS LRG++              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VVEDVKK+P+AA +G V+RRRLQLMMYNNMYRIMFDRRFES++D
Sbjct:   21 IAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEED 200          
BLAST of CX294887 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.010e-78
Identity = 142/180 (78.89%), Postives = 156/180 (86.67%), Query Frame = 1
Query:   97 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 636
            I VSKLRGKR              NWLQVGDDLNHRNL+ LAK++GD+ LLRMGQRNLVVVSSPD AKEVLHTQGVEFGSRTRNVVFDIFTG+GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+DV+K+P+AA +G+V+RRRLQLMMYNNMYRIMFDRRFES++D
Sbjct:   21 IVVSKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEED 200          
The following BLAST results are available for this feature:
BLAST of CX294887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TCMO_POPKI1.395e-8384.44Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CATRO3.435e-8283.71Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_RUTGR7.653e-8283.89Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_POPTM9.996e-8282.78Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PETCR1.596e-7981.11Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_HELTU1.596e-7980.00Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC1.596e-7979.44Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ZINEL1.034e-7879.44Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_SOYBN1.764e-7879.44Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU3.010e-7878.89Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]

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Properties
Property NameValue
Genbank descriptionC05057B02SK PhIFruit1 Citrus clementina cDNA clone C05057B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294887 ID=CX294887; Name=CX294887; organism=Citrus clementina; type=EST; length=637bp
CTCGTGCCGAATTCGGCACGAGGGTTAATCGTAAAGATGGATCTCCTCTT
GCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTA
CCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGCCCCCTC
CCCGTCCCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTTGAACCA
TCGGAACCTCTCCGACTTAGCCAAGAAATATGGAGATGTCCTCCTCCTCC
GCATGGGCCAGCGCAACCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAG
GAGGTTCTGCACACGCAGGGAGTGGAGTTCGGATCACGAACGAGGAACGT
CGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTCACAGTGT
ACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTTTCTTC
ACGAACAAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGC
TAGAGTCGTTGAGGATGTTAAGAAGGACCCCGAGGCGGCGACCAATGGGA
TCGTCTTGAGGAGGCGGCTGCAGCTTATGATGTACAACAACATGTACAGG
ATTATGTTTGATAGAAGATTCGAGAGTCAGGATGATC
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