CX294890

Overview
NameCX294890
Unique NameCX294890
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7316 contig Ccv1_Contig7316:608..1237. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.485e-106
Identity = 182/209 (87.08%), Postives = 199/209 (95.22%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GIKPE+INALHLIPKELSLKI+SKI AGERFTVYIVVPMWPEG PES SVQAILDWQ+RTM+MMYKD+VQAL+A GI+EDPRNYLTFFCLGNREVK+SGEYEPAE+PE D+DY+RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMG YQP+HLSTR PARGQIHGFRMSLWYEHLGMLD++FL PES ECV+KV
Sbjct:  533 GIKPEDINALHLIPKELSLKILSKIAAGERFTVYIVVPMWPEGIPESASVQAILDWQKRTMEMMYKDIVQALKANGIIEDPRNYLTFFCLGNREVKKSGEYEPAEKPEPDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKV 741          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 1.390e-104
Identity = 178/209 (85.17%), Postives = 196/209 (93.78%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GI PE+INALHLIPKELSLKIVSKIE GE+F VY+VVPMWPEG PESGSVQAILDWQRRTM+MMYKDV+QALRA+G+ EDPRNYLTFFCLGNREVK+ GEYEPAE+P+ D+DY+RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMGGYQP+HLS R PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KV
Sbjct:  535 GITPEDINALHLIPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESGSVQAILDWQRRTMEMMYKDVIQALRAQGLEEDPRNYLTFFCLGNREVKKDGEYEPAEKPDPDTDYMRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKV 743          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 6.900e-104
Identity = 178/210 (84.76%), Postives = 197/210 (93.81%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIM-EDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GIKPEEINALHLIPKELSLKIVSKI+AGE+F VY+VVPMWPEG PESGSVQAILDWQ+RTM+MMYKDV++ALR  G+  EDPR+YLTFFCLGNREVK+ GEYEP+E+PE D+DY+RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMGGYQPYHLSTR PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KV
Sbjct:  534 GIKPEEINALHLIPKELSLKIVSKIKAGEKFKVYVVVPMWPEGIPESGSVQAILDWQKRTMEMMYKDVIKALRENGLEGEDPRDYLTFFCLGNREVKKDGEYEPSEKPEPDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLSTRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKV 743          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 3.425e-103
Identity = 177/209 (84.69%), Postives = 193/209 (92.34%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GI PE+INALHLIPKELSLKIVSKIE GE+F VY+VVPMWPEG PES SVQAILDWQRRTM MMYKD+VQALRA+G+ EDPRNYLTFFCLGNREVK+ GEYEPAERP+ DS Y++AQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMGGYQP+HLS R PARGQIHGFRMSLWYEHLGMLD+TFL P S EC++KV
Sbjct:  535 GITPEDINALHLIPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESASVQAILDWQRRTMQMMYKDIVQALRAQGLEEDPRNYLTFFCLGNREVKKEGEYEPAERPDADSSYMKAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKV 743          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 373.244 bits (957), Expect = 5.841e-103
Identity = 174/209 (83.25%), Postives = 194/209 (92.82%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GI PE+INALHLIPKELSLKIV KIE GE+F VY+VVPMWPEG PES SVQAILDWQRRT++MMYKDV QALRA+G+ EDPRNYLTFFCLGNREVK+ GEYEPAERP+ D+DY+RAQEARRFMIYVH+KMMIVDDEYII+GSANINQRSM+GARD+EIAMGGYQP+HLS R PARGQ+HGFRMSLWYEHLGMLD+TFL P S EC++KV
Sbjct:  537 GITPEDINALHLIPKELSLKIVDKIEKGEKFRVYVVVPMWPEGIPESASVQAILDWQRRTLEMMYKDVTQALRAQGLEEDPRNYLTFFCLGNREVKKEGEYEPAERPDPDTDYMRAQEARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKV 745          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 3.786e-102
Identity = 175/208 (84.13%), Postives = 193/208 (92.79%), Query Frame = 2
Query:    5 IKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            IK E+I ALH+IPKEL+LKIVSKIEAGERFTVY+VVPMWPEG PES SVQAILDWQRRTM+MMYK +VQAL AKGI EDPRNYLTFFC+GNREVK+SG YEP+E PE DSDY+RAQEARRFMIYVH+KMMIVDDEYII+GSANINQRSM+GARD+EIAMG YQP+HL+TR PARGQIHGFRM+LWYEHLGMLD+TFL PES ECV KV
Sbjct:  534 IKVEDIGALHVIPKELALKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKHIVQALNAKGIEEDPRNYLTFFCIGNREVKKSGAYEPSETPEPDSDYIRAQEARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPHHLATREPARGQIHGFRMALWYEHLGMLDETFLHPESEECVSKV 741          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 4.945e-102
Identity = 178/208 (85.58%), Postives = 191/208 (91.83%), Query Frame = 2
Query:    5 IKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            IK EEI ALHLIPKELSLKIVSKIEAGERF VY+VVPMWPEG PES SVQAILDWQ+RT++MMYKDVVQALRAKG  EDPRNYLTFFCLGNREVK+SGEYEPAE+PE DSDY RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMGGYQPYHL+   PARGQ++GFRMSLWYEHLGML DTF +PES EC+ KV
Sbjct:  535 IKREEIGALHLIPKELSLKIVSKIEAGERFAVYVVVPMWPEGIPESSSVQAILDWQKRTIEMMYKDVVQALRAKGSDEDPRNYLTFFCLGNREVKKSGEYEPAEQPEPDSDYQRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLANTQPARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKV 742          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 1.439e-101
Identity = 173/209 (82.78%), Postives = 195/209 (93.30%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GIKPE+I ALHLIPKEL+LK+VSKIEAGERFTVY+VVPMWPEG PESGSVQAILDWQRRTM+MMY D+ +AL+AKGI  +P++YLTFFCLGNREVK++GEY+P E+PE D+DY RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMGGYQPYHL+TR PARGQIHGFRM+LWYEHLGMLDD F +PES ECV+KV
Sbjct:  537 GIKPEDIGALHLIPKELALKVVSKIEAGERFTVYVVVPMWPEGVPESGSVQAILDWQRRTMEMMYTDITEALQAKGIEANPKDYLTFFCLGNREVKQAGEYQPEEQPEADTDYSRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLDDVFQRPESLECVQKV 745          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 3.205e-101
Identity = 175/209 (83.73%), Postives = 190/209 (90.91%), Query Frame = 2
Query:    2 GIKPEEINALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            GIKPEEI ALHLIPKELSLKIVSKIEAGERFTVY+VVPMWPEG PES SVQAILDWQRRTM+MMY D+ QAL A GI  +P++YLTFFCLGNREVK+ GEYEP E PE D+DY+RAQEARRFMIYVH KMMIVDDEYIIIGSANINQRSM+GARD+EIAMG YQPYHL+TR PARGQIHGFRMSLWYEHLGML+D F +PES ECV+KV
Sbjct:  537 GIKPEEIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYTDIAQALEANGIEANPKDYLTFFCLGNREVKQEGEYEPEEHPEPDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKV 745          
BLAST of CX294890 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.260e-97
Identity = 167/198 (84.34%), Postives = 186/198 (93.94%), Query Frame = 2
Query:   35 LIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHGFRMSLWYEHLGMLDDTFLQPESSECVKKV 628
            LIPKELSLKIVSKIEAG+RFTVY+V+PMWPEG PESGSVQAILDWQRRTM+MMYKD++QAL+A GI EDPRNYLTFFCLGNREVKR GEYEP+E+P+ D+DY RAQE+RRFMIYVHAKMMIVDDEYIIIGSANINQRSM+GA+D+EIAMG YQP+HL+TR PARGQIHGFRMSLWYEHLGMLDDT   PES +CV+KV
Sbjct:  544 LIPKELSLKIVSKIEAGKRFTVYVVLPMWPEGIPESGSVQAILDWQRRTMEMMYKDIIQALQANGIEEDPRNYLTFFCLGNREVKRDGEYEPSEKPDPDTDYSRAQESRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGAKDSEIAMGAYQPHHLATREPARGQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKV 741          
The following BLAST results are available for this feature:
BLAST of CX294890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PLDA1_RICCO1.485e-10687.08Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_ARATH1.390e-10485.17Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA2_ARATH6.900e-10484.76Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_BRAOC3.425e-10384.69Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA2_BRAOC5.841e-10383.25Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_TOBAC3.786e-10284.13Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA1_VIGUN4.945e-10285.58Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA1_ORYSJ1.439e-10182.78Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA1_MAIZE3.205e-10183.73Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_PIMBR1.260e-9784.34Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]

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Properties
Property NameValue
Genbank descriptionC05057B07SK PhIFruit1 Citrus clementina cDNA clone C05057B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294890 ID=CX294890; Name=CX294890; organism=Citrus clementina; type=EST; length=630bp
TGGCATTAAGCCTGAGGAAATTAATGCTTTGCATCTGATTCCAAAGGAGC
TCTCACTTAAGATTGTTAGTAAGATTGAGGCTGGGGAGAGATTTACCGTA
TATATTGTTGTCCCAATGTGGCCAGAGGGGTTTCCAGAGTCTGGTTCAGT
TCAGGCAATATTAGATTGGCAGAGAAGGACAATGGATATGATGTATAAGG
ATGTTGTTCAGGCTCTTAGAGCAAAGGGCATTATGGAAGATCCCAGGAAC
TATTTGACATTCTTCTGCCTTGGGAATCGGGAGGTGAAGAGGAGTGGTGA
ATATGAACCTGCAGAAAGGCCGGAGGATGATTCAGACTATCTTAGAGCTC
AGGAAGCTCGACGCTTCATGATCTACGTTCATGCCAAGATGATGATTGTT
GATGACGAATACATTATAATTGGATCTGCCAACATCAACCAGCGATCAAT
GGAGGGTGCCAGGGACACTGAGATAGCCATGGGAGGCTACCAACCATATC
ATTTGTCAACCAGGGTGCCAGCACGAGGCCAGATACACGGCTTCCGTATG
TCACTATGGTACGAGCACCTAGGCATGCTCGATGACACCTTCCTCCAGCC
AGAAAGTAGCGAATGTGTTAAGAAGGTAAC
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