CX294907

Overview
NameCX294907
Unique NameCX294907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig594 contig Ccv1_Contig594:1..621. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.221e-97
Identity = 172/187 (91.98%), Postives = 182/187 (97.33%), Query Frame = 2 
Query:    5 CRIRHEDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            C++   DLPKLVEGLKRLAKSDPMVVC+IEESGEHI+AGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVL++S RTVMSKSPNKHNRLYMEARP+EEGLAEAID+GRIGPRDDPK RSKIL+EE+GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE
Sbjct:  495 CKVA-SDLPKLVEGLKRLAKSDPMVVCSIEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 680
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.073e-85
Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV CTIEE+GEHI+AGAGELHLEICLKDLQDDFMGGAEI  S+PVVSFRETV+  S   VMSKSPNKHNRLYM+ARP+E+GLAEAID+G+IGPRDDPK RSKILSEEFGWDK+LAKKI  FGP+TTGPNMV D+ KGVQYLNEIKDSVVA FQWASKEG LAEE
Sbjct:  502 DLPKLVEGLKRLAKSDPMVQCTIEETGEHIIAGAGELHLEICLKDLQDDFMGGAEIRVSEPVVSFRETVIGTSDHVVMSKSPNKHNRLYMQARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKELAKKILAFGPDTTGPNMVTDITKGVQYLNEIKDSVVAAFQWASKEGVLAEE 682
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.984e-69
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C  EESGEHIVAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S +  +SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D   A+KIWCFGPE TGPN++VD  KGVQYLNEIKDSVVAGFQWA+KEG +AEE
Sbjct:  502 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEE 681
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 258.455 bits (659), Expect = 2.032e-68
Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.032e-68
Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 2.032e-68
Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 2.032e-68
Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 7.722e-68
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 256.529 bits (654), Expect = 7.722e-68
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
[Close]
BLAST of CX294907 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 7.722e-68
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 
Query:   23 DLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEE 565
            DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EE
Sbjct:  516 DLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEE 695
The following BLAST results are available for this feature:
BLAST of CX294907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_BETVU1.221e-9791.98Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE1.073e-8585.08Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_BOMMO6.984e-6970.72Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_RAT2.032e-6870.72Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE2.032e-6870.72Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU2.032e-6870.72Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_CRIGR2.032e-6870.72Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_PONAB7.722e-6870.17Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN7.722e-6870.17Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA7.722e-6870.17Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05057D02SK PhIFruit1 Citrus clementina cDNA clone C05057D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294907 ID=CX294907; Name=CX294907; organism=Citrus clementina; type=EST; length=621bp
CTCGTGCCGAATTCGGCACGAGGATCTCCCTAAGCTTGTTGAAGGTCTTA
AGCGTTTGGCCAAGTCAGATCCTATGGTTGTCTGTACAATTGAGGAGTCT
GGCGAGCACATTGTTGCTGGTGCGGGAGAACTTCACCTTGAGATCTGTTT
GAAGGATCTGCAGGACGATTTCATGGGAGGTGCTGAAATTATTAAATCTG
ATCCTGTTGTGTCCTTCCGTGAAACTGTCCTTGAGAAGTCTTGCCGCACT
GTGATGAGTAAGTCTCCCAACAAGCATAATCGTCTCTACATGGAAGCCCG
ACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCCGCATTGGTC
CAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAGGAGTTCGGC
TGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCCTGAGACCAC
TGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAATACTTGAATG
AAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCGAAAGAAGGT
GCGCTGGCTGAAGAGACATGAGAGGTATCTGCTTTGAGTATGTGATGTTG
TTCTTACGCTGATGCCATTCA
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