CX294924

Overview
NameCX294924
Unique NameCX294924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12558 contig Ccv1_Contig12558:156..779. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 2.174e-102
Identity = 184/208 (88.46%), Postives = 192/208 (92.31%), Query Frame = 3
Query:   15 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGI-----SYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYS 623
            V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI       A+GKR + GDPAY RAACEASLKRLDIDCIDLYYQHR+DTRVPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE EI+PTCRELGIGIVAYS
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYS 215          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 6.325e-102
Identity = 176/204 (86.27%), Postives = 192/204 (94.12%), Query Frame = 3
Query:   12 AVKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYS 623
            +V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+S+ADGKREI GDPAY R ACE S KRL +DCIDLYYQHRID RVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAYS
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYS 210          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.650e-41
Identity = 95/197 (48.22%), Postives = 125/197 (63.45%), Query Frame = 3
Query:   51 VSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISY--ADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYS 623
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y   A + SLKRL IDCIDLYY HR     PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y+
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYA 208          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.483e-23
Identity = 74/203 (36.45%), Postives = 113/203 (55.67%), Query Frame = 3
Query:   42 GLEVSAQGLGCMGMSAFYGPPK--PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMRE--RVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYS 623
            G +V   G G MG++     PK  P+ +   ++++A++ G    D  + YG   P +N  LL +  +       +V L+ K G+ +     +  G+P +   + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AYS
Sbjct:    6 GFKVGPIGFGLMGLT---WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYS 203          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.855e-23
Identity = 61/165 (36.97%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  129 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAY 620
            L+  A++ G+  +DT+ IYG   +E L+G+ ++  G+R  + +ATK      DG  E+     + R+  E SLKRL  D IDLYY H  D + P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  + Y
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPY 205          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.304e-22
Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3
Query:   30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAY 620
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A      E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLY 203          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 66/204 (32.35%), Postives = 104/204 (50.98%), Query Frame = 3
Query:   15 VKRIKLGSQGLEVSAQGLG--CMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAY 620
            +K+ KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P + + + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L +R+ E    P  +E  I  + Y
Sbjct:    1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPY 203          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20
Identity = 68/203 (33.50%), Postives = 107/203 (52.71%), Query Frame = 3
Query:   15 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDP--AYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVA 617
            +++ KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY + A + SL RL  D IDLY  H       I+ TI   ++L +EG I+Y G+S    + I+       I ++ +++SL+ R  E E +P   E  I +VA
Sbjct:    1 MRKRKLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN-RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVA 195          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 76/214 (35.51%), Postives = 106/214 (49.53%), Query Frame = 3
Query:   30 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISYAD---GKREIRGDPAYA-RAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHA------VHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYS 623
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y  R   E SLKRL  D I+LY  H ID R P +      +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+VA+S
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWS 215          
BLAST of CX294924 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 72/202 (35.64%), Postives = 112/202 (55.45%), Query Frame = 3
Query:   42 GLEVSAQGLGCMGMSAFYGPPK-PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMR--ERVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYS 623
            G +V   GLG MG++  + P + P      L+++A++ G    +  + YG   P  N  LL    +   +  ++V L+ K G  +        GDP     + + +L RL     +DL+   R+D +VPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY+
Sbjct:    6 GFKVGPIGLGLMGLT--WRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYA 203          
The following BLAST results are available for this feature:
BLAST of CX294924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
A115_TOBAC2.174e-10288.46Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE6.325e-10286.27IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO3.650e-4148.22Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO4.483e-2336.45Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU5.855e-2336.97Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
GS69_BACSU1.304e-2234.34General stress protein 69 OS=Bacillus subtilis GN=... [more]
IOLS_BACSU5.480e-2132.35Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YQKF_BACSU1.221e-2033.50Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
YRPG_BACSU1.595e-2035.51Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
PLR2_SCHPO1.595e-2035.64Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionC05057F02SK PhIFruit1 Citrus clementina cDNA clone C05057F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294924 ID=CX294924; Name=CX294924; organism=Citrus clementina; type=EST; length=624bp
AAATGGCGGGGGCAGTGAAGAGAATCAAGCTTGGTTCACAAGGTCTAGAG
GTTTCAGCACAAGGCTTAGGATGCATGGGCATGTCCGCCTTCTACGGGCC
CCCGAAGCCAGAATCCGACATGATCGCCTTGATCCACCATGCCATTAACA
GTGGCATCACTCTACTTGACACCTCCGATATTTACGGGCCCCACACCAAT
GAAATCCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGAAAGAGTTGA
ATTGGCTACTAAATTTGGTATCAGCTATGCGGATGGTAAAAGGGAAATTC
GCGGTGACCCGGCTTATGCGAGAGCTGCATGTGAGGCCAGCTTGAAGCGT
CTGGATATTGATTGTATTGATCTTTATTACCAACATCGCATTGATACACG
AGTTCCCATTGAAGTCACGATTGGAGAACTCAAGAAACTAGTTGAAGAGG
GTAAGATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCAACAATTAGA
CGAGCTCATGCTGTCCATCCAATAACAGCTGTGCAGTTGGAATGGTCCTT
GTGGTCACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCAGGGAACTTG
GCATTGGAATTGTTGCATACAGTC
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