CX294926

Overview
NameCX294926
Unique NameCX294926
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5939 contig Ccv1_Contig5939:678..1290. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.292e-59
Identity = 117/197 (59.39%), Postives = 144/197 (73.10%), Query Frame = 1
Query:   22 GILINGR-----GSGAA-FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLSL 594
            GI+ING+     GS A  F ++ GKTYR+RI NVG++ S+NFRIQNHKMKLVE+EG+H LQ  Y SLDVHVGQ +  +VTA+Q  +DYY+V SSRF  TV+TTTG+L Y    GP S  +P GP V   WSLNQ RS R NLTAS  RPNPQGSYHYG IN T+TI+L ++ G+V+GK R+A+N VS    +TPL L
Sbjct:  191 GIVINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGP-VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKL 386          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.635e-54
Identity = 107/201 (53.23%), Postives = 136/201 (67.66%), Query Frame = 1
Query:   22 GILINGRGSGAA------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGP---TVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLSLL 597
            GI+ING+ +         F +E GKTYR R  N+G+++S+N R Q H MKLVE+EG+HT+Q  Y SLD+HVGQ  SVLVTADQ  +DYY+VVSSRF    L++  I+ Y+N  GP S  +P  P   T  I WS+NQ RS R NLTAS  RPNPQGSYHYG IN T+TI++ +S  QV GK RY +N +S    +TPL L+
Sbjct:  189 GIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLV 389          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.190e-50
Identity = 109/211 (51.66%), Postives = 136/211 (64.45%), Query Frame = 1
Query:   22 GILINGRG------------SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTV----LTTTGILHYSNSAGPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSS-SAGQVNGKQRYAINSVSFIPADTPLSL 594
            G+LING+G                 NV+ GKTYR+R+ NVG+  SLNFRIQNHK+ L+E EG +T Q  ++  DVHVGQSYS LVT DQ A  DYYIV S+RF +      +T  GILHYSNS GP SGP+P   T V   WS +NQ R+I+ N +ASG RPNPQGS+HYG IN T+T  L S    ++NGK R  +N +SF+   TP+ L
Sbjct:  191 GVLINGKGPFKYNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRL 401          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.093e-48
Identity = 108/211 (51.18%), Postives = 133/211 (63.03%), Query Frame = 1
Query:   22 GILINGRG------------SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTV----LTTTGILHYSNSAGPVSGPIPGGPT-VQIDWS-LNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQ-VNGKQRYAINSVSFIPADTPLSL 594
            G+LING+G                F+VE GKTYR+R+ NVG+  SLNFRIQNH + LVE EG +T Q  ++  DVHVGQSYS LVT DQ A  DYYIV S+RF +      +T   ILHYSNS GPVSGP+P   T V   WS ++Q ++IR N +ASG RPNPQGS+HYG IN T T  L S     +NG  R  +N +SF+   TP+ L
Sbjct:  192 GVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRL 402          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.366e-45
Identity = 105/212 (49.53%), Postives = 133/212 (62.74%), Query Frame = 1
Query:   22 GILINGRG----------SGAAFN---VEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPA-RDYYIVVSSRFTSTVL----TTTGILHYSNSAGPVSGPIPGGPTVQID--WSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAG-QVNGKQRYAINSVSFIPADTPLSL 594
            G+LING+G           G  F    V  GKTYRLR+SNVG+  SLNFRIQ H + L E EG++T+Q  Y+SLD+HVGQSYS LVT DQ A  DYYIV S+R  +  +    T  GIL Y+NS G   G +P GP  + D  +S+NQARSIR N++ASG RPNPQGS+ YG IN T    L +     ++GK+R  +N +SF    TP+ L
Sbjct:  188 GVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRL 399          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 1
Query:   58 FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDW-SLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTP 585
            F+V   KTYR+RI++     +LNF I NH++ +VE +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R     T   LT    L  S S  P S P P  P     W   +++++    +TA+   P P        +   + I L ++   +NG  ++AIN VS     TP
Sbjct:  206 FHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPP-PQTPA----WDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTP 375          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15
Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 1
Query:   31 INGRGSGAAF--NVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTP 585
            ++G+   A F  +V+  KTYR+RI++     SLNF I NH++ +VE +G +      S +D++ G+SYSVL+T DQ P  +Y++ +  R     T   LT    L  S S  P+S P P  P  +     +++++    + A+   P P   Y+       + + L ++  ++NG  ++AIN+VS     TP
Sbjct:  230 LSGKEKCAPFILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPP-PETPHWE---DFDRSKNFTFRIFAAMGSPKPPVRYN-------RRLFLLNTQNRINGFMKWAINNVSLALPPTP 410          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 1
Query:   58 FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSR----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDW-SLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTP 585
            F+V   KTYR+RI++     +LNF I NH + +VE +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R     T   LT    L  S S  P S P P  P     W   +++++    +TA+   P P        + + + I L ++   +NG  ++AIN VS     TP
Sbjct:  236 FHVMPKKTYRIRIASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPP-PETPA----WDDFDRSKNFTYRITAAMGSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTP 405          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 53/176 (30.11%), Postives = 84/176 (47.73%), Query Frame = 1
Query:   64 VEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSR----FTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTA--SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFI 570
            V   K YRLR+++     SL+  I  HKM +VE +G +    +   +D++ G+SYSVL   DQ P ++Y+I ++ R     T   LT    L  S S  P   P    P   +    N ++S  + + A    P+P PQ      L+NT           +++G  ++AIN+VS +
Sbjct:  236 VRPNKIYRLRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPP----PIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNT---------QNKIDGYTKWAINNVSLV 398          
BLAST of CX294926 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 58/191 (30.37%), Postives = 89/191 (46.60%), Query Frame = 1
Query:   49 GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTV----LTTTGILHYSNSAG------PVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRY-AINSVSFIPADTPL 588
            G   +VE GKTY LRI N  L + L F++  H++ +VEV+  +T      +L +  GQ+ +VLV A+Q A  Y + VS    + V     T T  LHY+N+         +  P P   T  +    +   S+ S      P   PQ   H  L+  T  + ++     +NG +    IN+V+FI   TP+
Sbjct:  214 GFKLSVENGKTYMLRIINAALNDDLFFKVAGHELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDNKTGTATLHYANTVSSSMASLTLVKPPPQNATHIVSKFTDSLHSLNSK---EYPANVPQTVDHSLLL--TVGVGVNPCPSCINGTRVVGTINNVTFIMPSTPI 399          
The following BLAST results are available for this feature:
BLAST of CX294926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ASOL_BRANA1.292e-5959.39L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC1.635e-5453.23L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKS2_ARATH3.190e-5051.66Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH5.093e-4851.18Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH2.366e-4549.53Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
ASO_CUCPM3.332e-1532.42L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCSA4.352e-1530.73L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCMA5.683e-1532.42L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_TOBAC2.640e-1230.11L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC22_ORYSJ4.979e-1130.37Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]

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Properties
Property NameValue
Genbank descriptionC05057F05SK PhIFruit1 Citrus clementina cDNA clone C05057F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294926 ID=CX294926; Name=CX294926; organism=Citrus clementina; type=EST; length=613bp
CTCGTGCCGAATTCGGCACGAGGAATTCTTATCAATGGCCGGGGGAGCGG
TGCTGCTTTTAATGTTGAACAAGGAAAAACTTACAGGCTCAGAATATCAA
ATGTTGGATTGCAAAACTCACTCAATTTCCGCATTCAAAACCATAAGATG
AAGTTGGTAGAAGTTGAGGGAACACATACCCTCCAGACTACCTACTCATC
ACTTGATGTTCATGTCGGACAATCATACTCCGTTTTGGTTACTGCTGATC
AACCTGCACGGGACTATTACATTGTTGTTTCCTCTCGCTTCACCTCCACT
GTCCTCACCACCACCGGCATTCTTCATTACAGTAACTCTGCAGGTCCAGT
TTCAGGCCCCATCCCAGGTGGACCAACTGTCCAAATTGACTGGTCACTAA
ACCAAGCACGCTCTATCAGGTCTAATCTCACAGCAAGTGGACCAAGGCCT
AACCCACAGGGTTCATACCACTATGGTCTCATAAACACTACCAAAACTAT
CAGGCTTTCAAGTTCTGCTGGGCAAGTTAATGGCAAGCAGAGATATGCAA
TCAACAGCGTGTCCTTTATTCCAGCTGACACTCCCCTAAGCTTGCTGACT
ACTTCAGATTGGA
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