CX294968

Overview
NameCX294968
Unique NameCX294968
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig652 contig Ccv1_Contig652:222..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 98/251 (39.04%), Postives = 125/251 (49.80%), Query Frame = 2
Query:   29 HILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVN--XXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGCEPAYPTPKCVRKCVK-KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            H L D ++  VN+     W+A  N  F N  V   K L G         LG P         + LKLP+SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YK
Sbjct:   24 HPLSDELVNYVNKQ-NTTWQAGHN--FYNVDVSYLKRLCGT-------FLGGPKPPQRVMFTEDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGIMCGDGCNGGYPAGAWNFWTRKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38
Identity = 98/251 (39.04%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   29 HILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVN--XXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGCEPAYPTPKCVRKCVK-KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            H L D ++  VN+     W+A  N  F N  V   K L G         LG P         + LKLP+SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++   DIMAEIYKNGPVE +F+VY DF  YK
Sbjct:   24 HPLSDELVNYVNKR-NTTWQAGHN--FYNVDVSYLKKLCGT-------FLGGPKPPQRVMFTEDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSERDIMAEIYKNGPVEGAFSVYSDFLLYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38
Identity = 97/251 (38.65%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   29 HILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVN--XXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGCEPAYPTPKCVRKCVK-KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            H L D ++  VN+     W+A  N  F N  +   K L G         LG P         + LKLP SFDAR  WPQC TI  I DQG CGSCWAFGAVEA+SDR CIH   ++S+ V+                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YK
Sbjct:   24 HPLSDELVNYVNKR-NTTWQAGHN--FYNVDMSYLKRLCGT-------FLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 95/255 (37.25%), Postives = 126/255 (49.41%), Query Frame = 2
Query:   17 KLDSHILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTE-------ECDPYFDSTGCSH------PGCEPAYPTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            K  SH L D +I  +N+     W+A RN  F N  +   K L G        +LG P         + + LP+SFDAR  W  C TI++I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   YP  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KHY  ++Y ++   ++IMAEIYKNGPVE +FTV+ DF  YK
Sbjct:   20 KPSSHPLSDDMINYINKQ-NTTWQAGRN--FYNVDISYLKKLCGT-------VLGGPNLPERVGFSEDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPY-TIPPCEHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 92/248 (37.10%), Postives = 122/248 (49.19%), Query Frame = 2
Query:   35 LQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDK---SLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGCEPAYPTPKCVRKCVK-KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            L D ++  VN+     WKA  N  F N  +   K L G       +L G  +   D     + LP+SFDAR  WP C TI  I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   +P  AW ++   G+V+         C PY     C H      P C     TPKC + C    +  ++  KH+  S+Y + ++ ++IMAEIYKNGPVE +F+VY DF  YK
Sbjct:   26 LSDELVNFVNKQ-NTTWKAGHN--FYNVDLSYVKKLCGA------ILGGPKLPQRDAFAADVVLPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34
Identity = 86/247 (34.82%), Postives = 125/247 (50.61%), Query Frame = 2
Query:   35 LQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLG--VPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVN-XXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGC-EPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            L D +I  +NE+P AGWKA ++ +F  +++   + L+G +     +       V  HD ++++P  FD+R  WP C +IS+I DQ  CGSCWAFGAVEA++DR CI  G   S  ++                  +P  AW Y+V  G+VT         C PY     C H      P C    Y TP+C + C K  +  +   KHY   +Y + ++ + I  +I   GPVE +F VYEDF +YK
Sbjct:   30 LSDEMISFINEHPDAGWKADKSDRF--HSLDDARILMGARKEDAEMKRNRRPTVDHHDLNVEIPSQFDSRKKWPHCKSISQIRDQSRCGSCWAFGAVEAMTDRICIQSGGGQSAELSALDLISCCKDCGDGCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPY-PFPKCEHHTKGKYPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYK 273          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34
Identity = 89/252 (35.32%), Postives = 123/252 (48.81%), Query Frame = 2
Query:   29 HILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVK----THDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGC--------------SHPGCEPAYPTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            H L D +I  +N+     W+A RN  F N  +   K L G        +LG P         + + LP++FDAR  W  C TI +I DQG CGSCWAFGAVEA+SDR CIH    +N+ +S                   YP  AW ++   G+V+     Y    GC              S P C     TP+C + C    +  ++  KH+  ++Y +++  ++IMAEIYKNGPVE +FTV+ DF  YK
Sbjct:   24 HPLSDDLINYINKQ-NTTWQAGRN--FYNVDISYLKKLCGT-------VLGGPKLPGRVAFGEDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSG--GVYNSHVGCLPYTIPPCEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVEGAFTVFSDFLTYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 92/249 (36.95%), Postives = 130/249 (52.21%), Query Frame = 2
Query:   35 LQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLG--VPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLS-VNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGC-EPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            L D II  +NE+P AGW+A ++ +F  +++   +  +G +     L       V  +D ++++P +FD+R  WP C +I+ I DQ  CGSCW+FGAVEA+SDR CI  G   N+ LS V+                  P  AW Y+V  G+VT         C+PY     C H      P C    Y TP+C + C +K +  +   KH   S+Y + +D + I  EI K GPVE SFTVYEDF +YK
Sbjct:   29 LSDDIISYINEHPNAGWRAEKSNRF--HSLDDARIQMGARREEPDLRRKRRPTVDHNDWNVEIPSNFDSRKKWPGCKSIATIRDQSRCGSCWSFGAVEAMSDRSCIQSGGKQNVELSAVDLLTCCESCGLGCEGGILGP--AWDYWVKEGIVTASSKENHTGCEPY-PFPKCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEASFTVYEDFLNYK 272          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 92/249 (36.95%), Postives = 117/249 (46.99%), Query Frame = 2
Query:   35 LQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLK----LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGCEPAYPTPKCVRKCVK-KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYK 721
            L D ++  +N+     W A  N  F N  +   K L G         LG P      +      LPKSFDAR  WP C TI  I DQG CGSCWAFGAVEA+SDR CI     +N+ +S                   +P  AW ++   G+V+         C PY     C H      P C     TPKC + C       ++  KH+  S+Y I+ + ++IMAEIYKNGPVE +FTVY DF  YK
Sbjct:   26 LSDELVNFINKQ-NTTWTAGHN--FYNVDLSYVKKLCGT-------FLGGPKLPQRAAFAADMILPKSFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIRSNGRVNVEVSAEDMLTCCGDECGDGCNGGFPSGAWNFWTKKGLVSGGLYDSHVGCRPY-SIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYTPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFLQYK 263          
BLAST of CX294968 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34
Identity = 93/257 (36.19%), Postives = 125/257 (48.64%), Query Frame = 2
Query:   41 DSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVP------------VKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSH--------PGCEPAYPTPKCVRKCVK--KNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHY 718
            D +I  VNEN    W A +  +FS+        + G     K  L+GV              KT D  L +P+SFD+R  WP+C +I  I DQ  CGSCWAFGAVEA+SDR CI  H  + ++LS +                  P++AWRY+V  G+VT         C PY     C H        P     YPTPKC +KCV    ++ +   K +  SAY +  D E I  E+  +GP+E++F VYEDF +Y
Sbjct:   44 DDLIDYVNENQNL-WTAKKQRRFSS--------VYGENDKAKWGLMGVNHVRLSVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGD-PLAAWRYWVKDGIVTGSNYTANNGCKPY-PFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNY 289          
The following BLAST results are available for this feature:
BLAST of CX294968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CATB_MACFA1.308e-3839.04Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_PONAB2.230e-3839.04Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_HUMAN4.969e-3838.65Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_RAT7.175e-3737.25Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN5.142e-3537.10Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CYSP_SCHJA1.496e-3434.82Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATB_MOUSE1.496e-3435.32Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CYSP_SCHMA1.954e-3436.95Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATB_PIG5.685e-3436.95Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CPR6_CAEEL9.697e-3436.19Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionC05065B07SK DroRLeaf1 Citrus clementina cDNA clone C05065B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294968 ID=CX294968; Name=CX294968; organism=Citrus clementina; type=EST; length=721bp
GAGGGTTTCCTAGCTCAAGCTTGATTCTCATATTCTCCAGGATTCAATCA
TCAAAGAAGTGAATGAGAACCCTAAGGCTGGATGGAAAGCTGCCAGAAAT
CCTCAATTTTCCAATTACACTGTTGGGCAATTTAAGCACCTTCTTGGAGT
CAAGCCAACACCTAAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTCATG
ACAAATCCTTGAAGTTGCCTAAAAGCTTTGATGCAAGGTCCGCTTGGCCA
CAATGCAGCACCATTAGTAGGATCCTAGATCAGGGCCATTGTGGTTCTTG
TTGGGCTTTTGGTGCTGTTGAAGCGCTATCTGATCGTTTCTGCATCCATT
TTGGCATGAACCTATCTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGC
TTTTTGTGTGGAGATGGTTGTGACGGGGGTTATCCAATTTCTGCATGGCG
ATACTTTGTCCACCATGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTG
ATAGTACTGGCTGTTCCCACCCTGGTTGTGAGCCGGCATATCCTACTCCA
AAGTGTGTGAGGAAGTGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAA
GCACTACAGTATTAGTGCATATAGAATCAATTCTGATCCAGAGGACATAA
TGGCAGAAATTTACAAGAATGGACCAGTTGAAGTTTCCTTCACAGTTTAT
GAAGATTTTGCTCACTACAAA
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