CX294978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: AB6I_ARATH (ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana GN=ABCI6 PE=1 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.109e-85 Identity = 170/239 (71.13%), Postives = 197/239 (82.43%), Query Frame = 1 Query: 7 TLPALPLLCR-RSNYHRHHL---SLNRVTAALSAVDSPLKSSS---DGQDEKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALE 702 T P+ LLC R+N + + V + S+V S + S S D D PLL+V L AVIAES+QEILKGVNL+V EGEVHA+MGKNGSGKST SKVLVGHPDYEVT GS+VFKG+NLL+MEPE+RSLAGLFMSFQSPVEIPGV+N+DFL+MA+NAR+RKLGQPEL PI+FY++L KLE ++MKTDFLNRNVNEGFSGGERKRNEILQLAVLGA+LAILDEIDSGLDVDAL+ Sbjct: 36 TSPSRVLLCNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVSNMDFLNMAFNARKRKLGQPELDPIQFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAELAILDEIDSGLDVDALQ 274
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_CYAPA (Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa GN=ycf16 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.003e-60 Identity = 114/185 (61.62%), Postives = 144/185 (77.84%), Query Frame = 1 Query: 151 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 +L+V L A + + EILKGVNL +N GE+HAIMG NGSGKST SK+L GHP Y+VT G ++FK +NLLE+EPEER+ AG+F++FQ P+EI GV+NIDFL +AYN RR++ G EL P+ FY+ + KL + M FLNRNVNEGFSGGE+KRNEILQ+A+L LAILDE DSGLD+DAL + Sbjct: 8 ILEVKNLKAQVDGT--EILKGVNLTINSGEIHAIMGPNGSGKSTFSKILAGHPAYQVTGGEILFKNKNLLELEPEERARAGVFLAFQYPIEIAGVSNIDFLRLAYNNRRKEEGLTELDPLTFYSIVKEKLNVVKMDPHFLNRNVNEGFSGGEKKRNEILQMALLNPSLAILDETDSGLDIDALRI 190
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: Y075_SYNY3 (Probable ATP-dependent transporter slr0075 OS=Synechocystis sp. (strain PCC 6803) GN=slr0075 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.574e-58 Identity = 109/188 (57.98%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 142 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 SQ +L + LTA + +ILKGVNL + GEVHAIMG+NGSGKSTLSKV+ GHPDYE+T G ++++G++L +EP ER+LAG+F++FQ P+EIPGV+N+DFL +AYNA+R+ LG EL +F + KL+ + M FL R++NEGFSGGE+KRNEILQ+A+L L+ILDEIDSGLD+DAL + Sbjct: 2 SQTILSIKNLTASV--DGNQILKGVNLEIKAGEVHAIMGRNGSGKSTLSKVITGHPDYEITGGEIIYQGQDLSALEPHERALAGIFLAFQYPLEIPGVSNLDFLRIAYNAKRKHLGLEELDTFDFEDLIQEKLDVVKMNPAFLERSLNEGFSGGEKKRNEILQMAILEPTLSILDEIDSGLDIDALRI 187
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_GUITH (Probable ATP-dependent transporter ycf16 OS=Guillardia theta GN=ycf16 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 105/183 (57.38%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 151 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDAL 699 +L+VT L A + E K I+KG+NL+VN GE+HAIMGKNGSGKST +K++ GHPDY +T G + ++ ++LE+ PE+R+ G+F+SFQ P+EIPGV N DFL +A NARR G PE+ P+EF+ Y+ KL + +K FL R+VNEGFSGGE+KRNEILQ+++L LA+LDE DSGLD+DAL Sbjct: 5 ILEVTNLHAAVNEIK--IVKGLNLVVNAGEIHAIMGKNGSGKSTFAKIIAGHPDYTITNGDITYQHTSILELTPEDRAKRGIFLSFQYPIEIPGVTNADFLRLACNARRIYQGLPEMEPLEFFEYINSKLPLVDLKPSFLTRDVNEGFSGGEKKRNEILQMSILDTKLAVLDETDSGLDIDAL 185
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_PORYE (Probable ATP-dependent transporter ycf16 OS=Porphyra yezoensis GN=ycf16 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56 Identity = 106/188 (56.38%), Postives = 144/188 (76.60%), Query Frame = 1 Query: 142 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 SQ +L++ L A + E+ ILKGVNL + GE+HAIMG NGSGKSTLSKV+ GHP Y + G ++F G+++LE+EP+ER+ AG+F++FQ PVEIPGV+N DFL +A NARR+ G E P+EF+ + K++ + M+ FL RNVNEGFSGGE+KRNEILQ+A+L + ++ILDE DSGLD+DAL + Sbjct: 2 SQTILEIKDLYASVGETT--ILKGVNLSIRAGEIHAIMGPNGSGKSTLSKVIAGHPAYSLISGDILFFGQSILEIEPDERAKAGIFLAFQYPVEIPGVSNSDFLRIALNARRKFQGLSEFSPLEFFQLITEKIDLVGMQESFLTRNVNEGFSGGEKKRNEILQMALLDSKISILDETDSGLDIDALRV 187
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_PORPU (Probable ATP-dependent transporter ycf16 OS=Porphyra purpurea GN=ycf16 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.368e-56 Identity = 107/188 (56.91%), Postives = 144/188 (76.60%), Query Frame = 1 Query: 142 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 S +L++ L A + + ILKGVNL + GE+HAIMG NGSGKSTLSKV+ GHP Y + G ++F G ++L+MEP+ER+ AG+F++FQ PVEIPGV+N DFL +A NARR+ PEL P+EF+ + K+ + MK FL+RNVNEGFSGGE+KRNEILQ+A+L ++L+ILDE DSGLD+DAL++ Sbjct: 2 SDYILEIKDLHASVNDVP--ILKGVNLSIKPGEIHAIMGPNGSGKSTLSKVIAGHPAYSLLNGDILFYGRSILKMEPDERARAGIFLAFQYPVEIPGVSNADFLRIALNARRKFRELPELSPLEFFQLITEKINLVGMKESFLSRNVNEGFSGGEKKRNEILQMALLESNLSILDETDSGLDIDALKI 187
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_ODOSI (Probable ATP-dependent transporter ycf16 OS=Odontella sinensis GN=ycf16 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.368e-56 Identity = 103/186 (55.38%), Postives = 145/186 (77.96%), Query Frame = 1 Query: 148 PLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALEM 705 P+L++ L A I E+ EILK +NL +++GE+HAIMG NGSGKST SKVL GHP Y + G ++FKG ++L ++PEERS G+F++FQ P+EIPGV+N DFL +AYN++++ L + E+ PI F+ + KL+ + M FL+RNVNEGFSGGE+KRNEILQ+ +L ++L+ILDE DSGLD+DAL++ Sbjct: 6 PILEIKNLKACINEN--EILKDLNLKIHKGEIHAIMGPNGSGKSTFSKVLAGHPAYNILSGDILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNEDFLRLAYNSKQKFLNKDEVDPISFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRNEILQMILLDSELSILDETDSGLDIDALKI 189
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_ANTSP (Probable ATP-dependent transporter ycf16 OS=Antithamnion sp. GN=ycf16 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.322e-54 Identity = 99/184 (53.80%), Postives = 141/184 (76.63%), Query Frame = 1 Query: 151 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALE 702 LL + L I E+ +IL +NL + GE+HAIMGKNGSGKSTL+KV+ GHP Y++T G ++F+ +++ E+EPE+RS G+F++FQ PVEIPGV N DFL +AYNA+R + EL P+ F++++ K+ + + + FL+RNVNEGFSGGE+K+NEILQ+++L + LAILDE DSGLD+DAL+ Sbjct: 6 LLNIKNLDVTIGET--QILNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYKITNGQILFENQDVTEIEPEDRSHLGIFLAFQYPVEIPGVTNADFLRIAYNAKRAFDNKEELDPLSFFSFIENKISNIDLNSTFLSRNVNEGFSGGEKKKNEILQMSLLNSKLAILDETDSGLDIDALK 187
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_GALSU (Probable ATP-dependent transporter ycf16 OS=Galdieria sulphuraria GN=ycf16 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.255e-53 Identity = 100/188 (53.19%), Postives = 141/188 (75.00%), Query Frame = 1 Query: 139 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALE 702 K + LLQ+ L +A +++ IL G+NL VN+GE+HAIMG NGSGKSTLSKV+ GH Y+V +G ++F+ +NLL E+R+ G+F++FQ P+EI GVNNIDFL +AYN++ + + + P++F +YPKL+ + + FL R VNEGFSGGE+K+NEILQ+++L A LAILDE DSGLD+DAL+ Sbjct: 2 KHKSLLQIKNLHVKLANTEEYILNGINLNVNQGEIHAIMGPNGSGKSTLSKVIAGHSLYKVVKGEIIFQDQNLLNYTIEDRANLGIFLAFQYPLEIAGVNNIDFLRLAYNSKLKFNQRNPVDPLKFLEIVYPKLKLVGLDESFLYRKVNEGFSGGEKKKNEILQMSLLDAKLAILDETDSGLDIDALQ 189
BLAST of CX294978 vs. ExPASy Swiss-Prot
Match: ABCX_CYACA (Probable ATP-dependent transporter ycf16 OS=Cyanidium caldarium GN=ycf16 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47 Identity = 96/187 (51.34%), Postives = 125/187 (66.84%), Query Frame = 1 Query: 139 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPELGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDAL 699 K +L + L A + E E+L +NL + E H IMG NGSGKS+L KV+ GHP Y+V EG + + ++ + PEERS G+F+ FQ P+EI GVNN DFL YN +R+K G +L P+EF L P L+ +SM FL+RN+NEGFSGGE+KRNEILQ+ + LAILDE DSGLD+DAL Sbjct: 2 KETSVLTIQNLKACVNEF--EVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYKVIEGKIFVENIDITQATPEERSNLGVFLGFQYPIEITGVNNADFLRAVYNQKRKKQGLKDLDPLEFLEILSPILDLVSMDQTFLHRNLNEGFSGGEKKRNEILQMILSKPRLAILDEPDSGLDIDAL 186 The following BLAST results are available for this feature:
BLAST of CX294978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294978 ID=CX294978; Name=CX294978; organism=Citrus clementina; type=EST; length=728bpback to top |