CX294993

Overview
NameCX294993
Unique NameCX294993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  429 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREAL 701
            P  +G++  +E LK + N  FK K +  A+ +YS+AI+LN ++A YY NR+ AYL   C+  A  D ++ I LDKK +K Y RR  +  AL
Sbjct:   19 PPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 109          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  429 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREAL 701
            P   G++  +E LK + N  FK K +  A+ +YS+AI+LN ++A YY NR+ AYL   C+  A  D ++ I LDKK +K Y RR  +  AL
Sbjct:   19 PPAEGTLKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 109          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  429 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREAL 701
            P  +G++  +E LK + N  FK K +  A+ +YS+AI+LN  +A YY NR+ AYL   C+  A  D ++ I LDKK +K Y RR  +  AL
Sbjct:   19 PPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 109          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: TOM34_RAT (Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus GN=Tomm34 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  384 SLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            S  ++     N VP   + G ++ + +LKE+GN   K     KA+  YSE++  +   +  YSNRA  +L L  +++AE+DC++ + LD KNVKA+ RR  A +AL  Y  +
Sbjct:  172 SKSKETTATKNRVP---SAGDVERARVLKEEGNELVKKGNHKKAIEKYSESLLFSSLESATYSNRALCHLVLKQYKEAEKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSS 280          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13
Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  372 DLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            ++  S  ++     N VP   + G ++ +++LKE+GN   K     KA+  YSE++  +   +  YSNRA  YL L  + +A +DC++ + LD KNVKA+ RR  A +AL  Y  +
Sbjct:  168 EMAKSKSKETTATKNRVP---SAGDVEKAKVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSS 280          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: TOM34_HUMAN (Mitochondrial import receptor subunit TOM34 OS=Homo sapiens GN=TOMM34 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 3
Query:  372 DLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            ++  S  ++     N VP   + G ++ + +LKE+GN   K     KA+  YSE++  +   +  YSNRA  YL L  + +A +DC++ + LD KNVKA+ RR  A +AL  Y  +
Sbjct:  168 EMAKSKSKETTATKNRVP---SAGDVEKARVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSS 280          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  468 KEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            K +GN   K K + KA+  Y+EAI L+ T + Y+SNRA A+ ++  FQ A  DC + I LD KN+KAY RR  +  ALL + +A
Sbjct:   16 KNEGNVFVKEKHFLKAIEKYTEAIDLDSTQSIYFSNRAFAHFKVDNFQSALNDCDEAIKLDPKNIKAYHRRALSCMALLEFKKA 99          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: SPAG1_RAT (Sperm-associated antigen 1 OS=Rattus norvegicus GN=Spag1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  459 ELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREAL 701
            + LKE+GN   K K +  A++ Y+E +K+N  +   Y+NRA  YL+LG F++A+ DC K + +D KNVKA  R   A++ L
Sbjct:  606 QALKEEGNQLVKDKNYKDAISKYNECLKINSKACAIYTNRALCYLKLGQFEEAKLDCDKALQIDSKNVKASYRLELAQKGL 686          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  327 ITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDAS---ELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            +T    D  L  T+ +++++      +  +L    +T  S + S   E LK +GN   K + +  AV++Y +AI+LN  +A Y+ NRAAAY +LG +  A +DC + I +D    KAY R G A  +L  + EA
Sbjct:   45 VTVEDSDLALPQTLPEIFEAAAAGKELPPDLRSPQETPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEA 178          
BLAST of CX294993 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 36/94 (38.30%), Postives = 61/94 (64.89%), Query Frame = 3
Query:  438 NGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKKNVKAYLRRGTAREALLYYNEA 719
            N +   +E LK+  N AFKG ++++A++ Y++AI+LNG +A YY+NRA A+ +L  +  A +D ++ I +D +  K Y RRG A  A+  + +A
Sbjct:    8 NSNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDA 101          
The following BLAST results are available for this feature:
BLAST of CX294993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PPP5_HUMAN7.658e-1541.76Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]
PPP5_RAT1.000e-1441.76Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]
PPP5_MOUSE1.706e-1441.76Serine/threonine-protein phosphatase 5 OS=Mus musc... [more]
TOM34_RAT2.463e-1335.71Mitochondrial import receptor subunit TOM34 OS=Rat... [more]
TOM34_PONAB3.217e-1334.48Mitochondrial import receptor subunit TOM34 OS=Pon... [more]
TOM34_HUMAN4.202e-1334.48Mitochondrial import receptor subunit TOM34 OS=Hom... [more]
PPT1_YEAST4.202e-1345.24Serine/threonine-protein phosphatase T OS=Saccharo... [more]
SPAG1_RAT5.488e-1341.98Sperm-associated antigen 1 OS=Rattus norvegicus GN... [more]
SGTA_BOVIN1.223e-1233.58Small glutamine-rich tetratricopeptide repeat-cont... [more]
PPP5_SOLLC1.223e-1238.30Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]

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Properties
Property NameValue
Genbank descriptionC05065D08SK DroRLeaf1 Citrus clementina cDNA clone C05065D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294993 ID=CX294993; Name=CX294993; organism=Citrus clementina; type=EST; length=719bp
GAGGGTTAATCAGCCAACCAAGGTTAGGATATAATGTCTTTGAACGTGTT
CTTGAAGCAATTAATACAACACAAGACAACATCAAAATCTTATACAAAGT
CCGAAATGAGATGCGGGCAGCCCTTCAAAGGTTATTAAAGGATGATAAAA
TACTGGTCATTCCCACAGTTTCAGATCCTCCATTAAAGCTTAATACAAAG
AAAACTTATTCTGCTGAATTTCATGATAGAACACTTGTGCTATCAAGCAT
CGGAAGCATGTCTGGTTGCTGTCAGGTTGCCATTCCAATAGGAAAGTACA
ATGAGCATCCCATTTCTATTTCATTTATCACGTACCATGGTGGCGATAAA
TTTCTTCTTGATACAGTCTTAGATCTGTATGATTCCCTCCAAGAACAAGT
GAACATCGCTTCTAATTTAGTGCCACTGCCGGATACAAATGGTAGCATTG
ATGCTTCTGAACTTTTGAAAGAGAAGGGAAATGCTGCATTTAAAGGAAAG
CAATGGAATAAGGCTGTGAATTATTACAGTGAAGCTATTAAATTGAATGG
AACAAGTGCAACTTATTATTCGAACCGGGCAGCAGCTTACTTAGAATTAG
GATGCTTCCAACAAGCTGAAGAAGACTGCAGTAAGACAATTTCACTTGAT
AAGAAGAATGTGAAAGCTTATTTGAGACGGGGAACAGCTAGAGAGGCTCT
TCTCTATTATAACGAGGCT
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