CX294995

Overview
NameCX294995
Unique NameCX294995
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_ARATH (V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.397e-70
Identity = 132/162 (81.48%), Postives = 150/162 (92.59%), Query Frame = 3
Query:  192 QNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            QN RL VVPTVTMLGVMK+RLVGATRGHALLKKKSDALTVQFR +LK IVT KESMG++MK SSFAL E KYVAG+N+KH+VLENV+ A++KVRSR ENIAGVK+PKF++F++GETKNDLTGLARGGQQV+ CR AYVKAIE+LVELASLQTSFLTLDEAI+
Sbjct:    4 QNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLARGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIK 165          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_SUBDO (V-type proton ATPase subunit D OS=Suberites domuncula GN=VATPD PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43
Identity = 86/164 (52.44%), Postives = 125/164 (76.22%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ V P+   L +MK+RL GA +GH+LLK+K+DALT++FRQIL  I+ TK  MGEVMK+++F+L EAK+VAG+    +VL+NV  A I++ ++++N+AGV +P FE ++DG    +LTGL+RGGQ V +C+  + KA+ LLVELASLQT+F+TLDE I+
Sbjct:    1 MSGKDRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGEVMKEATFSLAEAKFVAGD-FSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSDGSDTYELTGLSRGGQLVSKCKEVFGKAVRLLVELASLQTAFVTLDEVIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_PONAB (V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 86/164 (52.44%), Postives = 123/164 (75.00%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAI+
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_MOUSE (V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 86/164 (52.44%), Postives = 123/164 (75.00%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAI+
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_HUMAN (V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 86/164 (52.44%), Postives = 123/164 (75.00%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAI+
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_BOVIN (V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 86/164 (52.44%), Postives = 123/164 (75.00%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+     V++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAI+
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_RABIT (V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 85/164 (51.83%), Postives = 122/164 (74.39%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EAK+ AG+      ++NV  A +K+R++++N+AGV +P FE++ +G    +LTGLARGG+Q+ + +  Y KA+ELLVELASLQTSF+TLDEAI+
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD-FSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_DICDI (V-type proton ATPase subunit D OS=Dictyostelium discoideum GN=atp6v1d PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.650e-41
Identity = 87/166 (52.41%), Postives = 120/166 (72.29%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKN--DLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   RL + PT   L VMK++L GA  GH+LLKKKSDALT++FR+IL NIV  K+ MG  M+D+SF+L  AKY AGE   + V+ENV N +I V+   EN+AGV +P FE  ++G   N  +LTGL++GGQQ+ + R +++KA+E L+ LASLQT+F+TLDE I+
Sbjct:    1 MSGKNRLNIFPTRMALTVMKTKLKGAVTGHSLLKKKSDALTIRFRRILANIVENKQLMGTTMRDASFSLAAAKYAAGE-FSNSVIENVSNPTIAVKMTTENVAGVHLPTFEKISEGVVSNSQELTGLSKGGQQINKSRESHIKAVEALIALASLQTAFITLDEVIK 165          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD2_DROME (Probable V-type proton ATPase subunit D 2 OS=Drosophila melanogaster GN=CG8310 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 86/164 (52.44%), Postives = 119/164 (72.56%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            MA   RL + P+     +MKSRL GAT+GH LLKKK+DAL ++FR IL  I+ TK  MG+VMK+++F+L E K+  G+ I  IVL+NV  A IK+R++++N+AGV +P FE +TDG    +L GLARGGQQ+ + +  Y  A+ LLV+LASLQTSF+TLD+ I+
Sbjct:    1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAAFSLAEVKFTTGD-INQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIK 163          
BLAST of CX294995 vs. ExPASy Swiss-Prot
Match: VATD_MANSE (V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.397e-40
Identity = 85/164 (51.83%), Postives = 117/164 (71.34%), Query Frame = 3
Query:  186 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAKYVAGENIKHIVLENVQNASIKVRSRQENIAGVKIPKFEYFTDGETKNDLTGLARGGQQVQQCRAAYVKAIELLVELASLQTSFLTLDEAIR 677
            M+   RL + P+     +MK RL GA +GH LLKKK+DAL V+FR IL  I+ TK  MGEVMK+++F+L EAK+  G+    +VL+NV  A IK+RS+++N+AGV +P FE + DG    +L GLARGGQQ+ + +  +  A++LLVELASLQTSF+TLDE I+
Sbjct:    1 MSGKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGEVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIK 163          
The following BLAST results are available for this feature:
BLAST of CX294995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
VATD_ARATH8.397e-7081.48V-type proton ATPase subunit D OS=Arabidopsis thal... [more]
VATD_SUBDO6.700e-4352.44V-type proton ATPase subunit D OS=Suberites domunc... [more]
VATD_PONAB2.546e-4252.44V-type proton ATPase subunit D OS=Pongo abelii GN=... [more]
VATD_MOUSE2.546e-4252.44V-type proton ATPase subunit D OS=Mus musculus GN=... [more]
VATD_HUMAN2.546e-4252.44V-type proton ATPase subunit D OS=Homo sapiens GN=... [more]
VATD_BOVIN2.546e-4252.44V-type proton ATPase subunit D OS=Bos taurus GN=AT... [more]
VATD_RABIT7.407e-4251.83V-type proton ATPase subunit D OS=Oryctolagus cuni... [more]
VATD_DICDI1.650e-4152.41V-type proton ATPase subunit D OS=Dictyostelium di... [more]
VATD2_DROME4.801e-4152.44Probable V-type proton ATPase subunit D 2 OS=Droso... [more]
VATD_MANSE1.397e-4051.83V-type proton ATPase subunit D OS=Manduca sexta PE... [more]

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Properties
Property NameValue
Genbank descriptionC05065D11SK DroRLeaf1 Citrus clementina cDNA clone C05065D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294995 ID=CX294995; Name=CX294995; organism=Citrus clementina; type=EST; length=722bp
GATTCGGCCGAGGAAAAACCACCAGTGTCAGTTCTGGACCCTTTTAAATT
TTTCTCGCTAATTTTCTCTGGAGCCAAATTCGATCTTTCACTTAAACCGG
AGTTAGGGTTCCATTTGATCTCATCGGATCGGCCTTTCGCGGAATCTTAA
ACTCCCTAATATTTTGGATCAGATAATTTGGAAAGATGGCGCAAAACCAG
CGGTTGACTGTGGTTCCCACAGTGACAATGCTAGGGGTTATGAAAAGTAG
GCTTGTTGGTGCTACAAGAGGGCATGCCCTTTTGAAGAAGAAGAGTGATG
CTTTAACTGTTCAGTTTCGTCAGATCCTTAAGAATATCGTGACTACGAAG
GAATCGATGGGAGAAGTTATGAAAGATTCTTCCTTTGCCCTGATTGAGGC
CAAGTATGTTGCTGGCGAAAACATCAAGCACATTGTTCTTGAGAATGTGC
AAAATGCTTCTATTAAAGTTCGATCCCGTCAAGAGAATATTGCAGGTGTT
AAGATTCCAAAGTTTGAGTACTTCACTGATGGCGAGACCAAGAATGATCT
TACAGGATTGGCTAGAGGTGGGCAACAAGTGCAACAGTGTCGTGCTGCTT
ATGTGAAAGCCATTGAGCTTCTTGTCGAGCTTGCTTCTCTTCAAACTTCG
TTTTTGACGCTGGATGAGGCGATTAGACCACAACCGCAGGGTTATGCTTT
GGAGATGTAGTCAAGCTAGATT
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