CX294996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43 Identity = 94/183 (51.37%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSGNNTGSNDEXXXXXXXXXXXXXXXXXXXT----QSSWTKKAEEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLD 633 +MSS D+MG VFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCH QTQK KSK+ ++S NN+GSND+ + QSSWTK+A E+DSP+ MSP DQLA+ PDSTCAQVIH ++I +R +P T+ K + +E ++F + +DL++G R+L+ Sbjct: 142 MMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNSGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN 321
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.541e-43 Identity = 94/183 (51.37%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSGNNTGSNDEXXXXXXXXXXXXXXXXXXXT----QSSWTKKAEEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLD 633 +MSS D+MG VFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCH QTQK KSK+ ++S NN GSND+ + QSSWTK+A E+DSP+ MSP DQLA+ PDSTCAQVIH ++I +R +P T+ K + +E ++F + +DL++G R+L+ Sbjct: 142 MMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN 321
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.106e-41 Identity = 97/189 (51.32%), Postives = 122/189 (64.55%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCT-QTQKSIKSKNVEKSGNNTGSNDEXXXXXXXXXXXXXXXXXXXTQSSWTKKAEEV-DSPRHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTE 657 +MSS DSMGLVFKCLSKGAVDFLVKPIRKNELK LWQHVWRRC T QTQKS+KSK+++KS ++GS+DE QSSWTKKA +V DSPR +S D++ DSTCAQV+HSN E ++ V A KE Q+H+++ E+ RDL++ +R+ DL LE + E Sbjct: 158 MMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVSLWDRV----DSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFED-VTMGRDLEISIRRNCDLALEPKDE 341
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.214e-38 Identity = 91/196 (46.43%), Postives = 115/196 (58.67%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSGNNTGSN----------DEXXXXXXXXXXXXXXXXXXXTQSSWTKKAEEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQT 654 +MSS DSMG VFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCH +TQK K K ++ NN+GSN ++ TQSSWTK+A E+DSP+ MSP DQ ++ PDSTCAQVIH +EI +R +P + + H+E N + L++G R + +EYQ+ Sbjct: 161 MMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS 351
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.214e-38 Identity = 91/196 (46.43%), Postives = 115/196 (58.67%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSGNNTGSN----------DEXXXXXXXXXXXXXXXXXXXTQSSWTKKAEEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQT 654 +MSS DSMG VFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCH +TQK K K ++ NN+GSN ++ TQSSWTK+A E+DSP+ MSP DQ ++ PDSTCAQVIH +EI +R +P + + H+E N + L++G R + +EYQ+ Sbjct: 161 MMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS 351
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23 Identity = 61/130 (46.92%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSGNNTGSND----EXXXXXXXXXXXXXXXXXXXTQSSWTKKAEEVDSPRHMSPSDQLAECPD 474 +MSS DSM LVFKCLS GAVDFLVKPIRKNELKNLWQHVWRRCH +KS+K ++ + S N+ +D E TQSSWTK+A + S SPS+Q + P+ Sbjct: 144 MMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRASDTKS---TSPSNQFPDAPN 270
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCTQTQKSIKSKNVEKSG 306 +MSS DS+ +VFKC+ KGA DFLVKPIRKNEL+NLWQHVWR+ TQ + ++ ++ +K+G Sbjct: 123 MMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK-QLSSGVLDVQHTQQEDNLTERHEQKTG 191
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 222 +MSS DS+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWRR Sbjct: 117 MMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
BLAST of CX294996 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 28/42 (66.67%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 97 VMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 222 +MS+ DS+ V+KC+ KGA D+LVKP+R+NEL+NLWQHVWRR Sbjct: 130 MMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRR 171 The following BLAST results are available for this feature:
BLAST of CX294996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294996 ID=CX294996; Name=CX294996; organism=Citrus clementina; type=EST; length=657bpback to top |