CX294997

Overview
NameCX294997
Unique NameCX294997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y1960_ARATH (Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 7.194e-118
Identity = 205/221 (92.76%), Postives = 215/221 (97.29%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRWNRLENLL 664
            EWVE  KLNEQ+AIESQGLKVLDLVNTGIQCSLRQLLEYG+FHADPHPGNLLATP+GKLAFLDFGMMSETPEEARFAIIGHVVH+VNRDYEAMARDYYAL FLSPDVDVTPI+PALR+FFDDALN +VSELNFKT+VDGLGAV YQYPFNVP YYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL+ELLFKDG+FRWNRLENLL
Sbjct:  335 EWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPIIPALRDFFDDALNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFRWNRLENLL 555          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y005_SYNY3 (Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803) GN=sll0005 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.717e-77
Identity = 135/221 (61.09%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRWNRLENLL 664
            EWVE +KL    AI++QG+    LV  G+QCSLRQLLE+G+FHADPHPGNLLA  +G+LA+LDFGMMS      R+ +I  VVH+VNRD++++A+DY  LDFL PD D+ PI+PAL   F +AL +SV+ELNFK+I D + A++Y++PF VPAYYALI+RS+  LEG+A+  DPNFKVL+ +YPY AKRLLTD +  LR +L ELLFK+G FRWNRLENLL
Sbjct:  291 EWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHADPHPGNLLAMADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDFLKPDTDLKPIIPALGQVFGNALGASVAELNFKSITDQMSAMMYEFPFRVPAYYALIIRSMVTLEGIAIGIDPNFKVLSKAYPYIAKRLLTDQSEELRTSLKELLFKEGSFRWNRLENLL 511          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y1919_SYNY3 (Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803) GN=slr1919 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.065e-65
Identity = 111/221 (50.23%), Postives = 155/221 (70.14%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRWNRLENLL 664
            EW++  KL +   I + GL   D++  G+   LRQLLE+G+FHADPHPGNL AT +G++A++DFGMM +     +  I   +V ++N+DY A+  D+ AL FL+P+ D+TPI+PAL N F  A+  SV + NFKTI D    ++Y YPF VPA +ALI+RSL   EGLAL  DPNFK++  +YPY A+RLLT  +P LR  L+++LFK+G+F+W RLEN+L
Sbjct:  258 EWIQGFKLTDTDKIRAAGLDPSDIIRIGVTSGLRQLLEHGFFHADPHPGNLFATLDGRMAYIDFGMMDQLEPGTKETIASSIVQLINKDYLALTEDFIALGFLAPNTDITPIIPALENVFGSAIGQSVQDFNFKTITDDFSELMYDYPFRVPAKFALIIRSLVTQEGLALSLDPNFKIVEVAYPYVARRLLTGESPQLRRQLIDVLFKNGKFQWQRLENML 478          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y4139_ARATH (Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.628e-55
Identity = 94/221 (42.53%), Postives = 146/221 (66.06%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRWNRLENLL 664
            EW++ ++  +  AI+  G+ +   +  G+  +LRQLLE+G FH DPHPGN+ A  +G++A++DFG ++   ++ +  +I  VVH VN DY  MA D+  L FL+ D DV+PIVPAL   + ++    +++ NF+++      ++Y +P  +P  ++L++RSL   EG+     P+FK L  +YPY AKRLLTDPNP LR+ L+++LFKDG F+W RLENLL
Sbjct:  356 EWIDGIRCTDPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALEAIWQNSAGKGLADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGVFQWKRLENLL 576          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y1181_ARATH (Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.750e-53
Identity = 98/221 (44.34%), Postives = 149/221 (67.42%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVELLFKDGRFRWNRLENLL 664
            EWVE  KLNE        +  L LV  G+ CS  QLLEYG++HADPHPGN L T +G+LA+LDFGMM +   E R   +   +H+VNRD++A+A+D+  L  L P  + + +  AL + F DA++  V  ++F  ++  LG  +Y++ F +P Y++L++RSL VLEG+A+   PN+KVL ++YP+ A+++LTD +P L+ +L  LL+++G FR +RLE+LL
Sbjct:  307 EWVEGQKLNE--------VNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDAISRGVRNISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGISPNYKVLGSTYPWIARKILTDSSPQLKSSLQNLLYEEGVFRIDRLESLL 519          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y1770_SYNY3 (Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803) GN=sll1770 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.222e-26
Identity = 63/198 (31.82%), Postives = 109/198 (55.05%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 592
            E++  +K++   A+E+ GL+  +L   G +  L QLL +G+FHADPHPGNL  +PE G+L F DFGMM E   + +  ++  +  +  ++ E +     AL  L    D+ PI  +++   D+ ++    E +   I D L  + Y  PF  PA +  ++R+ + LEG+    DP+F  +A + P FA +++ + N +
Sbjct:  273 EYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALGALKETEDMGPIRRSVQFLLDNFMDKPFEEQSITKISDDLYEIAYDQPFRFPATFTFVMRAFSTLEGVGKGLDPDFNFMAVAQP-FALQIMNNSNGF 469          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: Y095_SYNY3 (Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803) GN=sll0095 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23
Identity = 57/204 (27.94%), Postives = 108/204 (52.94%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 613
            E++  +K++++ A+E+ G+ +  ++ TGI   L+QLL  G+F +DPHPGN+    +G L F DFG M+E    A+  ++     ++ +D   +      +  + P  D++PI   +    D+  +  +    F  + + + A+  Q PF +P     IL+S++ L+G+A   DP + ++AAS P+     +  P   L  AL++
Sbjct:  250 EYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAVDSQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVEPKGDLSPIKRIINFLLDNFRDKPIDIKAFDQVGEEVYAMFQQQPFRLPPQMTFILKSISTLDGIARALDPRYNLIAASQPFIQSITVAQPKRSLAMALLQ 453          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMB (Probable ubiquinone biosynthesis protein ubiB OS=Neisseria meningitidis serogroup B GN=ubiB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15
Identity = 42/188 (22.34%), Postives = 91/188 (48.40%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 565
            EW++   +++   +++ G+ +  L + G++    Q+   G+FHAD HPGN+L   + +   LDFG++    +  +  +  + +   NRDY  +A  +    ++  D     +  A+R   +   N  +S+++F  ++  L  V  ++   +     L+ ++L  +EGL    DP+  +   + P+  K
Sbjct:  239 EWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: UBIB_SHEHH (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 52/208 (25.00%), Postives = 98/208 (47.12%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLAT---PEGKLAF-LDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVE 613
            E ++ + ++++VA+E+QG  +  L   G++    Q+    +FHAD HPGN+  +   P   L   LD G+M    EE +  +  + +   NRDY  +A+ Y    ++SPD DV     A++   +   N  + E++F  ++  L     ++   V     L+ ++L  +EGL     P   +   + P+  + +     P +  A V+
Sbjct:  243 ERIDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPLYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSPDTDVAAFEQAVKVVCEPMFNKPLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQWMAEQVGPKVMAAKVK 450          
BLAST of CX294997 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMA (Probable ubiquinone biosynthesis protein ubiB OS=Neisseria meningitidis serogroup A GN=ubiB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 42/188 (22.34%), Postives = 90/188 (47.87%), Query Frame = 2
Query:    2 EWVEVVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAK 565
            EW++   + +   +++ G+ +  L + G++    Q+   G+FHAD HPGN+L   + +   LDFG++    +  +  +  + +   NRDY  +A  +    ++  D     +  A+R   +   N  +S+++F  ++  L  V  ++   +     L+ ++L  +EGL    DP+  +   + P+  K
Sbjct:  239 EWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426          
The following BLAST results are available for this feature:
BLAST of CX294997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
Y1960_ARATH7.194e-11892.76Uncharacterized aarF domain-containing protein kin... [more]
Y005_SYNY34.717e-7761.09Uncharacterized protein sll0005 OS=Synechocystis s... [more]
Y1919_SYNY37.065e-6550.23Uncharacterized protein slr1919 OS=Synechocystis s... [more]
Y4139_ARATH6.628e-5542.53Uncharacterized aarF domain-containing protein kin... [more]
Y1181_ARATH4.750e-5344.34Uncharacterized aarF domain-containing protein kin... [more]
Y1770_SYNY32.222e-2631.82Uncharacterized protein sll1770 OS=Synechocystis s... [more]
Y095_SYNY33.003e-2327.94Uncharacterized protein sll0095 OS=Synechocystis s... [more]
UBIB_NEIMB1.765e-1522.34Probable ubiquinone biosynthesis protein ubiB OS=N... [more]
UBIB_SHEHH3.931e-1525.00Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_NEIMA3.931e-1522.34Probable ubiquinone biosynthesis protein ubiB OS=N... [more]

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Properties
Property NameValue
Genbank descriptionC05065E01SK DroRLeaf1 Citrus clementina cDNA clone C05065E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294997 ID=CX294997; Name=CX294997; organism=Citrus clementina; type=EST; length=667bp
GGAGTGGGTTGAAGTCGTCAAATTAAACGAGCAAGTTGCCATTGAAAGTC
AGGGTTTGAAGGTTTTGGATTTAGTGAACACGGGTATCCAGTGTAGTCTC
AGACAGCTTCTTGAGTATGGATATTTTCATGCAGATCCTCATCCTGGTAA
TCTCCTGGCAACACCTGAAGGAAAGCTGGCTTTTCTTGATTTTGGAATGA
TGAGTGAGACCCCAGAAGAGGCAAGATTTGCCATTATCGGTCATGTTGTT
CACATGGTTAATCGAGATTATGAAGCTATGGCCCGTGACTACTATGCTTT
AGACTTCTTGTCACCTGATGTTGATGTTACTCCGATTGTACCGGCACTTC
GGAACTTCTTTGATGATGCACTTAATTCCTCTGTGAGCGAGCTAAATTTC
AAAACAATTGTTGATGGTCTTGGTGCTGTTTTATATCAATATCCATTTAA
TGTCCCAGCATATTATGCATTAATATTGAGATCACTGACAGTACTCGAAG
GTTTAGCCCTCTATGCTGATCCCAACTTCAAGGTGTTGGCTGCTTCATAT
CCATATTTTGCTAAAAGGCTTCTCACCGATCCAAATCCATATCTTAGAGA
TGCTCTTGTTGAGTTGCTTTTCAAGGATGGGAGATTTAGATGGAATAGGC
TTGAAAACCTACTTGTT
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