CX295003

Overview
NameCX295003
Unique NameCX295003
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2291 contig Ccv1_Contig2291:170..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_TENMO (Trehalase OS=Tenebrio molitor PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 76/180 (42.22%), Postives = 111/180 (61.67%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIV--EKVRKSFQSSGLLGA-AGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 537
            +I+ V +N ++G W D W +           + S      F SNF P+W + F+S    +  E   + F +  ++    GI TSL+ +GEQWD+PN W P+Q +IV GL KSGS+ AK +A+++A RW+  N + +++TG M EKYNVE  G  GGGGEY+ Q+GFGW+NGVVL F+ +F
Sbjct:  385 SIEMVHYNRDDGIWYD-WDN-----------ELSQHRRMFFPSNFAPLWSETFDSRNAEILGEMAAEYFITQNMMDYHGGIPTSLSHTGEQWDYPNAWPPMQSIIVMGLDKSGSYRAKQLARELARRWVKANLIGFRQTGEMFEKYNVEVPGQNGGGGEYVVQSGFGWTNGVVLEFINQF 552          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_HUMAN (Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 73/180 (40.56%), Postives = 104/180 (57.78%), Query Frame = 1
Query:    4 AAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAA-GIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            AA+++V W+E+ G W DY +                +N   + SN  P+W   F SD  + +K  K  + + +L    GI TSL ++G+QWDFPN WAPLQ +++ GL K+    A+ +A  +A  WI TN+  Y +  AM+EKY+V   G  GGGGEY  Q GFGW+NGVVL  L+ +G
Sbjct:  385 AALNTVLWDEQTGAWFDYDLEK------------KKKNREFYPSNLTPLWAGCF-SDPGVADKALKYLEDNRILTYQYGIPTSLQKTGQQWDFPNAWAPLQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEYEVQEGFGWTNGVVLMLLDRYG 551          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_MOUSE (Trehalase OS=Mus musculus GN=Treh PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    4 AAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAA-GIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            AA+++V W+E+ G W DY +  G             +N   + SN  P+W   F SD  + +K  K  + S +L    GI TSL  +G+QWDFPN WAPLQ +++ GL KS S   + +A  +A  WI TN+  Y +  AM EKY++   G  GGGGEY  Q GFGW+NG+ L  L+ +G
Sbjct:  382 AAMEAVLWDEQKGAWFDYDLEKG------------KKNLEFYPSNLSPLWAGCF-SDPSVADKALKYLEDSKILTYQYGIPTSLRNTGQQWDFPNAWAPLQDLVIRGLAKSASPRTQEVAFQLAQNWIKTNFKVYSQKSAMFEKYDISNGGHPGGGGEYEVQEGFGWTNGLALMLLDRYG 548          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_RABIT (Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    4 AAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAA-GIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            AA+ ++ W+E+ G W DY + N              +N+  + SN  P+W   F SD  I +K  +  Q S +L    GI TSL  +G+QWDFPN WAPLQ +++ GL KS S   + +A  +A  WI TN+  Y +  AM+EKY++      GGGGEY  Q GFGW+NGV L  L+ +G
Sbjct:  385 AALTALLWDEDKGAWFDYDLEN------------QKKNHEFYPSNLTPLWAGCF-SDPAIADKALQYLQDSQILNHRHGIPTSLQNTGQQWDFPNAWAPLQDLVIRGLAKSPSARTQEVAFQLAQNWIRTNFDVYSQRSAMYEKYDISN-AQPGGGGEYEVQEGFGWTNGVALMLLDRYG 550          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_APIME (Trehalase OS=Apis mellifera PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33
Identity = 73/183 (39.89%), Postives = 104/183 (56.83%), Query Frame = 1
Query:    1 KAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFN--SDTCIVEKVRKSFQSSGL-LGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            K AI +V W++E G WLDY I N              + +  + +N +P+W D ++       V KV K  + + + L   GI T+L  SGEQWD+PN W PLQ+ ++  L K+    A+ +A +I+ RW+ +NY AY ET +M EKY+    G  GGGGEY  Q GFGWSNGV++  L  +G
Sbjct:  399 KRAIQAVLWHDEVGAWLDYDILNDI------------KRDYFYPTNILPLWTDCYDIAKREEYVSKVLKYLEKNKIMLNLGGIPTTLEHSGEQWDYPNAWPPLQYFVIMALNKTEDPWAQRLAYEISERWVRSNYKAYNETHSMFEKYDATVSGGHGGGGEYEVQLGFGWSNGVIMDLLNRYG 569          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_DROME (Trehalase OS=Drosophila melanogaster GN=Treh PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32
Identity = 72/189 (38.10%), Postives = 106/189 (56.08%), Query Frame = 1
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFN-SDTCIVEKVRKSFQSSGLLGA--AGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWPADLKIGC 567
            I  V WNEE G WLDY + N                +    +N  P+W+  FN S++  +     ++     L +   G+  +L+ +GEQWD PN WAP+Q+++VEGL    + EAK+M+   A RW+ TN+ A+ +   M+EKYN ++ G  GGGGEY  QTGFGWSNGV++ +L + G    +  GC
Sbjct:  411 IQEVLWNEEAGVWLDYDMIN------------QKPRDYYTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTLSYTGEQWDAPNVWAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKDRHMYEKYNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDISIGSGC 587          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_PIMHY (Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 68/180 (37.78%), Postives = 97/180 (53.89%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIV--EKVRKSFQSSGLLG-AAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 537
            AID V W+E  G WLD+ + N            S   N  F +N  P++   F+S    +  ++       +G+L    G   SL  +GEQWD PN W PLQ +IV+ L  S    A+ +A+++A+RW+  N+  Y ++G M EKY+    G  GGGGEY+ Q GFGW+NGVV  FL  +
Sbjct:  404 AIDDVLWSESEGVWLDFDLRN------------SQHRNYFFPTNVAPLYTQSFDSSKAQIYGQRAAAYLTRNGILDYMGGTPASLFPTGEQWDLPNAWPPLQSIIVQALRNSNEESAEKLAKELAIRWLRANHKGYSQSGQMFEKYDALNPGKFGGGGEYVVQEGFGWTNGVVYEFLNSY 571          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_BOMMO (Trehalase OS=Bombyx mori PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 64/183 (34.97%), Postives = 90/183 (49.18%), Query Frame = 1
Query:    1 KAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKS---FQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            +++I+   W+EE+G W DY I N            +      + SN  P+W++            R      +S  L    G+  SL  SGEQWDFPN W P   ++V  +   GS E+  +A+++A  W+      + E   M EKY+    G  GGGGEY  Q GFGWSNGVVL FL+ +G
Sbjct:  380 RSSIEQALWDEEDGVWHDYDILN------------NKPRRYFYTSNLAPLWMNAVEKPFLAKHGARVLEYLHESQALEYPGGVPVSLVNSGEQWDFPNAWPPEVSIVVTAIQNIGSEESSKLAKELAQVWVRACKSGFTEKKQMFEKYDALNAGKYGGGGEYTVQDGFGWSNGVVLEFLDRYG 550          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_DICDI (Trehalase OS=Dictyostelium discoideum GN=treh PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 64/187 (34.22%), Postives = 97/187 (51.87%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNS---DTCIVEKVRKSFQSSGLLGAAGIATSLTRSGE-QWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKET-----GAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            A+  VF+NE+  QW DY +            K S  N   + SN +P++ D+ +S   D   ++ + KS  +  +    G+ TSL  +   QWD  N W PLQ+ I+E +    +  +  + +++  RWI TN+  +  T     G M EKYN    G  GGGGEY+ Q GFGW+NGV L  L+++G
Sbjct:  412 AMQQVFFNEDTYQWNDYNL------------KTSTNNEAWYTSNILPLFADIQSSIDMDNQEIDLIFKSLANVLIAYPGGVPTSLISAQSLQWDGLNVWPPLQYWIIESIMTPNTTFSNMIGKNLIDRWITTNFCGWNSTLESEGGMMFEKYNANYIGVPGGGGEYVVQNGFGWTNGVDLYLLKKYG 586          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_CITK8 (Periplasmic trehalase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=treA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 1
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I++  WN + G + DY +            K+    N   A+   P++++    D     KV  + Q+  LL   G++T+  +SG+QWD PNGWAPLQ +  EGL   G     ++A D+  R++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  380 IETHLWNNQEGWYADYDL------------KSKKVRNQLTAATLFPLYVNAAAKDRA--SKVAAATQAH-LLQPGGLSTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQD---NVAMDVTWRFLTNVQHTYDREQKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLD 535          
The following BLAST results are available for this feature:
BLAST of CX295003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
TREA_TENMO3.195e-3742.22Trehalase OS=Tenebrio molitor PE=2 SV=1[more]
TREA_HUMAN6.025e-3640.56Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2[more]
TREA_MOUSE1.028e-3540.56Trehalase OS=Mus musculus GN=Treh PE=2 SV=1[more]
TREA_RABIT6.662e-3540.56Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV... [more]
TREA_APIME1.641e-3339.89Trehalase OS=Apis mellifera PE=1 SV=1[more]
TREA_DROME3.095e-3238.10Trehalase OS=Drosophila melanogaster GN=Treh PE=1 ... [more]
TREA_PIMHY1.536e-3137.78Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV... [more]
TREA_BOMMO6.039e-2834.97Trehalase OS=Bombyx mori PE=1 SV=1[more]
TREA_DICDI1.539e-2334.22Trehalase OS=Dictyostelium discoideum GN=treh PE=3... [more]
TREA_CITK81.103e-2134.48Periplasmic trehalase OS=Citrobacter koseri (strai... [more]

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Properties
Property NameValue
Genbank descriptionC05065E08SK DroRLeaf1 Citrus clementina cDNA clone C05065E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295003 ID=CX295003; Name=CX295003; organism=Citrus clementina; type=EST; length=717bp
AAAGCGGCAATAGACTCTGTTTTCTGGAATGAAGAAAATGGGCAATGGCT
GGATTACTGGATAAGTAATGGAACTAGTAGCCAGGAATGCCAAAGATGGA
AAGCTTCAAACCAAAATAATAATACATTTGCCTCAAACTTTGTACCCATA
TGGATTGATTTATTCAACTCTGATACTTGTATAGTGGAGAAAGTCCGAAA
AAGCTTTCAAAGTTCAGGCTTACTCGGTGCTGCTGGAATTGCAACTTCGT
TGACAAGATCAGGTGAACAATGGGACTTTCCTAACGGCTGGGCGCCACTT
CAACACATGATAGTAGAAGGTTTGGGTAAGTCAGGATCACATGAAGCAAA
GTCGATGGCACAAGACATTGCTATGAGGTGGATCAATACCAATTATGTTG
CATACAAAGAAACTGGTGCTATGCATGAAAAATATAATGTAGAAAAATGT
GGAGATATTGGAGGTGGTGGTGAATACATACCCCAGACTGGTTTTGGCTG
GTCAAATGGAGTCGTGTTGGCGTTCTTGGAGGAGTTTGGGTGGCCAGCAG
ATCTGAAGATAGGTTGCAATGGAGTTATGCTCTGAAGAGATGAGCTTTGA
CTTGGTTTATAATTACCGACCTAATTATCCTGGATTCTCTCCCTTCTTTT
TCTTGTCTTGTCAATTCTATTGAACGTGGGAACTTGATATATTATGTACA
TTCATATTTTGCATTTT
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