CX295005

Overview
NameCX295005
Unique NameCX295005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG2_XENLA (CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.580e-55
Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            IP+LGICLGMQ++V+EFAR++L +  ANS EFD  T NP VI MPE     MG TMRLGSR+T+F+T + V  KLY N ++V+ERHRHRYEVNPE++   EE GLKFVG+D  G+RMEI+EL  HP++VGVQFHPEF SRP +PS  +LG +LAA+ +L  Y+   QNGC
Sbjct:  393 IPFLGICLGMQLAVVEFARNILKMTDANSTEFDPNTKNPAVIDMPEHHPGDMGGTMRLGSRKTVFKTSESVVKKLYDNQDFVEERHRHRYEVNPELVQQFEEKGLKFVGQDNEGQRMEIIELEGHPYFVGVQFHPEFCSRPMKPSPPYLGFMLAASGKLNTYV---QNGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG2_CHICK (CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.924e-53
Identity = 102/169 (60.36%), Postives = 127/169 (75.15%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V+EFAR+ L  K ANS EFD +T +PVVI MPE +   MG TMRLG RRT+F+T + +  KLY +  +V+ERHRHRYEVNPE+    EE GLKFVG D  G RME++EL +HP++VGVQFHPEF SRP +PS  +LGL+LAAT  L AYL   Q GC
Sbjct:  394 PFLGVCLGMQLAVVEFARNCLNWKDANSTEFDPDTKSPVVIDMPEHNPGDMGGTMRLGKRRTVFKTQNSILRKLYGDEMFVEERHRHRYEVNPELTHCFEEKGLKFVGHDTEGNRMEMIELENHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGTLNAYL---QRGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG1_MOUSE (CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.629e-52
Identity = 101/169 (59.76%), Postives = 129/169 (76.33%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V+EF+R+VLG + ANS EFD +T +PVVI MPE +   MG TMRLG RRTLFQT + V  KLY + +Y++ERHRHR+EVNP +   LEE GLKFVG+D  G+RMEI+EL  HPF+VGVQ+HPEF SRP +PS  + GL+LA+  +L  YL   Q GC
Sbjct:  394 PFLGVCLGMQLAVVEFSRNVLGWQDANSTEFDPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDTDYLEERHRHRFEVNPVLKKCLEEQGLKFVGQDVEGERMEIVELEDHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLPHYL---QKGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG1_HUMAN (CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.778e-52
Identity = 101/169 (59.76%), Postives = 128/169 (75.74%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V+EF+R+VLG + ANS EFD  T +PVV+ MPE +   MG TMRLG RRTLFQT + V  KLY +A+Y++ERHRHR+EVNP     LEE GLKFVG+D  G+RMEI+EL  HPF+VGVQ+HPEF SRP +PS  + GL+LA+  +L  YL   Q GC
Sbjct:  394 PFLGVCLGMQLAVVEFSRNVLGWQDANSTEFDPTTSHPVVVDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDADYLEERHRHRFEVNPVWKKCLEEQGLKFVGQDVEGERMEIVELEDHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSHYL---QKGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG2_MOUSE (CTP synthase 2 OS=Mus musculus GN=Ctps2 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.189e-52
Identity = 99/163 (60.74%), Postives = 123/163 (75.46%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYL 489
            IP+LGICLGMQ++VIEFAR+ L LK ANS EF+  TP P+VI MPE +   +G TMRLG RRT+F T + +  KLY +  Y++ERHRHRYEVNP +I   E   L FVG+D  GKRMEI+EL SHP+++GVQFHPEF SRP +PS  +LGL+LAAT  L A+L
Sbjct:  393 IPFLGICLGMQLAVIEFARNCLNLKDANSTEFEPNTPVPLVIDMPEHNPGDLGGTMRLGLRRTVFTTENSILKKLYGDVPYIEERHRHRYEVNPNLINQFENKDLCFVGEDVDGKRMEIVELTSHPYFIGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAHL 555          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG2_RAT (CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.801e-51
Identity = 98/163 (60.12%), Postives = 121/163 (74.23%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYL 489
            IP+LGICLGMQ++VIEFAR+ L LK ANS EFD  TP P+VI MPE +   +G TMRLG RRT+F T + +  KLY +  Y++ERHRHRYEVNP +I   E   L FVG+D  GKRMEI+EL  HP+++GVQFHPEF SRP +PS  +LGL+LAAT  L  +L
Sbjct:  393 IPFLGICLGMQLAVIEFARNCLNLKDANSTEFDPNTPVPLVIDMPEHNPGDLGGTMRLGLRRTVFTTENSILKKLYGDVPYIEERHRHRYEVNPNLINQFENKDLCFVGEDVDGKRMEIIELTGHPYFIGVQFHPEFSSRPMKPSPPYLGLLLAATGTLNTHL 555          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG2_BOVIN (CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.843e-51
Identity = 96/163 (58.90%), Postives = 125/163 (76.69%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYL 489
            IP+LG+CLGMQ++VIEFAR+ L LK A+S EF+     PVVI MPE +  ++G TMRLG RRT+F+T + +  KLY +  +++ERHRHRYEVNP +I  LE+  L FVG+D  G+RMEI+EL +HP++VGVQFHPEF SRP +PS  +LGL+LAAT  L AYL
Sbjct:  393 IPFLGVCLGMQLAVIEFARNCLNLKDADSTEFEPNARVPVVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRYEVNPSLISQLEQKDLSFVGQDVDGERMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYL 555          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYG1B_XENLA (CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.843e-51
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V+EFAR VL  K ANS EF+ +T +PVVI MPE +   MG TMRLG RRT+F + + V  KLY   EYV+ERHRHRYEVNPE+   LE  GLKFVG+D  G+RMEI+EL  HP++VGVQ+HPEF SRP +PS  + GL+LA+  +L  Y+   + GC
Sbjct:  394 PFLGVCLGMQLAVVEFARDVLDWKDANSTEFNPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTIFHSQNSVMKKLYGGHEYVEERHRHRYEVNPELRRELEARGLKFVGQDTEGERMEIVELEDHPYFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSQYI---ERGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYG1A_XENLA (CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.938e-51
Identity = 97/169 (57.40%), Postives = 125/169 (73.96%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V+EFAR VLG   ANS EF+ +T +PVVI MPE +   MG TMRLG RRT+F + + +  KLY   EYV+ERHRHRYEVNPE+   LE  GLKFVG+D  G+RMEI+EL  HP++VGVQ+HPEF SRP +PS  + GL+LA+  +L  Y+   + GC
Sbjct:  394 PFLGVCLGMQLAVVEFARDVLGWTDANSTEFNPKTSHPVVIDMPEHNPGQMGGTMRLGKRRTIFHSQNSIMKKLYGGHEYVEERHRHRYEVNPELRRELEVRGLKFVGQDTEGERMEIVELEDHPYFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSQYI---ERGC 559          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG1_DANRE (CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.167e-50
Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 1
Query:    4 PYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEAYLNTHQNGC 510
            P+LG+CLGMQ++V EFAR++L    ANS EFD ET +PVVI MPE +   MG TMRLG RRT+F+    +  KLY + +YV+ERHRHR+EVNPE+    EE G +FVG+D  G+RME++E+  HP++VGVQ+HPEF SRP +PS  +LGL+LAA  +L++YL   Q GC
Sbjct:  394 PFLGVCLGMQLAVCEFARNMLDWTDANSTEFDPETKHPVVIDMPEHNPGQMGGTMRLGKRRTIFKNKSSILRKLYGDVDYVEERHRHRFEVNPELKHHFEEKGFRFVGQDVEGERMEVIEMDDHPYFVGVQYHPEFTSRPIKPSPPYLGLLLAAAGRLQSYL---QKGC 559          
The following BLAST results are available for this feature:
BLAST of CX295005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG2_XENLA4.580e-5560.59CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=... [more]
PYRG2_CHICK1.924e-5360.36CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1[more]
PYRG1_MOUSE1.629e-5259.76CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2[more]
PYRG1_HUMAN2.778e-5259.76CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2[more]
PYRG2_MOUSE6.189e-5260.74CTP synthase 2 OS=Mus musculus GN=Ctps2 PE=1 SV=1[more]
PYRG2_RAT1.801e-5160.12CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 ... [more]
PYRG2_BOVIN6.843e-5158.90CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1[more]
PYG1B_XENLA6.843e-5157.99CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 ... [more]
PYG1A_XENLA8.938e-5157.40CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 ... [more]
PYRG1_DANRE1.167e-5056.21CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05065E10SK DroRLeaf1 Citrus clementina cDNA clone C05065E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295005 ID=CX295005; Name=CX295005; organism=Citrus clementina; type=EST; length=730bp
ATTCCTTATCTTGGCATTTGCTTAGGCATGCAGATTTCTGTGATTGAGTT
TGCTAGATCTGTTCTGGGTTTAAAAAGGGCAAACAGCAATGAGTTTGATT
CTGAAACACCAAATCCTGTAGTAATTTTCATGCCTGAGGGTTCAAGAACA
CATATGGGAAGTACGATGAGACTAGGTTCTCGAAGAACATTATTCCAAAC
CCCTGATTGTGTCACCTCAAAGTTGTATCGTAATGCGGAGTATGTGGATG
AACGACATCGACACAGATATGAGGTGAACCCAGAGGTAATTGGAGTTCTA
GAAGAAGCTGGCCTAAAATTTGTAGGGAAGGATGAAACTGGAAAAAGAAT
GGAGATATTGGAGCTTCCAAGTCATCCATTCTATGTTGGAGTACAGTTCC
ATCCAGAGTTCAAATCACGGCCGGGGAGGCCCTCAGCTCTGTTTTTAGGT
CTTATATTGGCGGCGACAAAGCAGTTGGAAGCATATCTTAATACACATCA
GAATGGATGTTGATCTAGAACTCTTCACTGTCCAGAAGGTTCTAGAACAT
TTTTTACAATTATTAGATTTTGCCAGTCCCGGGATGAAGAGTCCGAGTGG
AGTGAAGAAAATTTTGTTGTACTTGAGTAGAAATTAGCAGTTATAGCATT
CTTCTATAAAATATGCATATTCCCAGCTAGTTTTGGGGGGGAAAAAAAGG
TTTTCAAAACTTTCCTCACACTAACATATA
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