CX295008

Overview
NameCX295008
Unique NameCX295008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11580 contig Ccv1_Contig11580:714..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.123e-86
Identity = 151/166 (90.96%), Postives = 161/166 (96.99%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQN QKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  224 VEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84
Identity = 147/166 (88.55%), Postives = 158/166 (95.18%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF EH+LSLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHF+VDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  226 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.506e-84
Identity = 147/166 (88.55%), Postives = 158/166 (95.18%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQNGQ+ITFPGEADEAPDTVTGDIVFVLQQKEHPKF+RKGDDLF +HTLSLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  205 VEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.705e-80
Identity = 141/166 (84.94%), Postives = 156/166 (93.98%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQ+GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLF EHTLSLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHFTV+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  226 VEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 2.168e-79
Identity = 140/166 (84.34%), Postives = 155/166 (93.37%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQ+ QKITF G+ADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFVEHTLSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  226 VEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.554e-77
Identity = 135/166 (81.33%), Postives = 154/166 (92.77%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 498
            VEKGMQ+ QKITF G+ADEAPDTVTGDIVFV+QQKEHPKFKRKG+DLFVEHT+SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  227 VEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 456
            V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  221 VDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 77/159 (48.43%), Postives = 107/159 (67.30%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 456
            V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V        ++EL E + T
Sbjct:  221 VDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.204e-37
Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 456
            V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  221 VDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.204e-37
Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 495
            ++KGM++GQKITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  212 IDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of CX295008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DNJH_CUCSA3.123e-8690.96DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO1.714e-8488.55DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO8.506e-8488.55DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU5.705e-8084.94DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH2.168e-7984.34Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH1.554e-7781.33Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_HUMAN2.425e-3848.43DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN4.136e-3848.43DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_MOUSE1.204e-3747.80DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA1_RAT1.204e-3747.31DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionC05065F01SK DroRLeaf1 Citrus clementina cDNA clone C05065F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295008 ID=CX295008; Name=CX295008; organism=Citrus clementina; type=EST; length=754bp
GTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGC
TGATGAAGCGCCCGACACTGTCACAGGTGACATTGTATTTGTTCTACAAC
AGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAG
CACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAAC
TCATTTGGATGGCCGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAG
TCAAGCCGGACCAATTCAAGGCCATAAATGATGAAGGAATGCCTATGTAT
CAGAGGCCATTTATGAGGGGCAAACTGTACATTCATTTCACTGTTGACTT
CCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTAC
CTCCAAGGACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAA
GAAACAACCCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCA
ACAAGCAGCTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTG
CCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTG
GCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGATTCTCAACATATT
TATTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGGTTTGTCTGTCTTT
ATTCCTATGTTTTTCTGATAACTGACTATGTAATGGAATTCTAGCGTTGC
ACCT
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