CX295011

Overview
NameCX295011
Unique NameCX295011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295011_ssr142 microsatellite CX295011_ssr142:142..153. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:16..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 305.449 bits (781), Expect = 1.751e-82
Identity = 150/163 (92.02%), Postives = 155/163 (95.09%), Query Frame = 2
Query:  194 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            MEST+KEMRDGASVLD D KSTV GGVEDVYGEDRATEDQLVTPWTISVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP  ISQQLQEKKLMN+IRQY++PLQKY AMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIF+RPQGLYIS
Sbjct:    1 MESTLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYIS 163          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.611e-78
Identity = 140/163 (85.89%), Postives = 154/163 (94.48%), Query Frame = 2
Query:  194 MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            MEST+K++RDGASVLD D K+TV GGVED+YGED ATEDQLVTPWT+SVASGY LLRDPRHNKGLAF +KERDAHYL GLLPP V +Q+LQE+KLMNSIRQY+VPLQKY+AMM+L+ERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS
Sbjct:    1 MESTLKDIRDGASVLDLDPKATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 163          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.317e-65
Identity = 120/177 (67.80%), Postives = 145/177 (81.92%), Query Frame = 2
Query:  167 KAEKVKRVRMESTMKEMRDGASVLDFDSKS-----TVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            + E+   V ++  +K++    +V   DS+S      V GGVEDVYGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAHYLRGLLPP V++  LQ KK+M++IRQYEVPLQ+Y AMM+L+ERNERLFYKLLI+N+EELLP+VYTPTVGEACQKYG+IF+ PQGLYIS
Sbjct:   43 RPERSVGVSVDGAVKDVNAPVAVEVADSESKKPTAVVGGGVEDVYGEDSATEDHFITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYIS 219          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.377e-63
Identity = 114/139 (82.01%), Postives = 129/139 (92.81%), Query Frame = 2
Query:  266 GGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            GGV D+YGED ATED L+TPWT SVASG  LLRDPR+NKGLAFTE ERDAHYLRGLLPP+V +Q+LQEK+LM+++RQYEVPL +Y+A+M+L+ERNERLFYKLLIDNV ELLPVVYTPTVGEACQKYGSIFRRPQGLYIS
Sbjct:   23 GGVRDLYGEDSATEDHLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPSVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYKLLIDNVAELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 161          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.033e-63
Identity = 112/144 (77.78%), Postives = 131/144 (90.97%), Query Frame = 2
Query:  251 KSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +STV GGV+DVYGED ATEDQ +TPWT+SVASG+ LLR+P +NKGLAF+E+ERD HYLRGLLPP VIS  LQ KK+MNSIR+Y+VPLQ+Y+AMM+L+E NERLFYKLLIDNVEELLP+VYTPTVGEACQKYG IF+RPQGL+ S
Sbjct:    4 ESTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGWIFKRPQGLFFS 147          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.180e-62
Identity = 110/141 (78.01%), Postives = 131/141 (92.91%), Query Frame = 2
Query:  260 VEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            + GGV DVYGE+ AT+DQLVTPW+ SVA G+ LLRDP+HNKGLAFTEKERDAH+LRGLLPP V+SQ+LQEKK + ++RQY+VPLQKY+AMM+L+ERNE+LFYKLL+D+VEELLP+VYTPTVGE CQKYGSIFRRPQGL+IS
Sbjct:   17 ITGGVADVYGEEFATQDQLVTPWSFSVACGHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQVPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFIS 157          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.704e-61
Identity = 109/143 (76.22%), Postives = 128/143 (89.51%), Query Frame = 2
Query:  254 STVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            + V GGVED+YGED ATED  +TPW++SVASGY LLRDP HNKGLAFTEKERDAH+LRGLLPP V++  LQ KK+M++IRQY+VPLQ+Y AMM+L++RNERLFYKLLI+NVEELLP+VYTPTVGEACQKYGSIF   QGL+IS
Sbjct:   77 AAVGGGVEDMYGEDTATEDHYITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHFLRGLLPPVVVNHDLQVKKMMHNIRQYQVPLQRYQAMMDLQQRNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIFENSQGLFIS 219          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 9.348e-60
Identity = 116/169 (68.64%), Postives = 136/169 (80.47%), Query Frame = 2
Query:  176 KVKRVRMESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +V+ V MES  +  +        +  +   GGVED+     ATE+  VTPW  SVASGY LLRDP HNKGLAF+EKERDAHYLRGLLPPAV+SQ LQ KK+M+++RQY VPLQ+Y+AMM+L+ERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFR+PQGLY+S
Sbjct:   55 RVEAVAMESAAETEKK-------EEVAAAGGGVEDM-----ATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVS 211          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.707e-53
Identity = 99/128 (77.34%), Postives = 112/128 (87.50%), Query Frame = 2
Query:  299 ATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            A+E+  V PW  SVASGY LLRDP HNKGLAFTE+ERD HYLRGLLPPAV+SQ+LQ KK MN++RQY+ PLQ+Y+AMM L+E +ERLFYKLLIDNV ELLP VYTPTVGEACQKYGSIF RPQGLY+S
Sbjct:   81 ASEELPVMPWATSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIAMMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVS 208          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28
Identity = 57/112 (50.89%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  347 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            G  L+ +PR NKG+AFT +ER    L+GLLPP + +Q +Q  +   ++++   PL+KY+ +M ++ERNE+LFY++L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136          
The following BLAST results are available for this feature:
BLAST of CX295011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR1.751e-8292.02NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI7.611e-7885.89NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR3.317e-6567.80NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU2.377e-6382.01NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_SOLLC9.033e-6377.78NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_MESCR1.180e-6278.01NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_FLATR1.704e-6176.22NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ9.348e-6068.64NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_MAIZE1.707e-5377.34NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOM_HUMAN1.901e-2850.89NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC05065F04SK DroRLeaf1 Citrus clementina cDNA clone C05065F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295011 ID=CX295011; Name=CX295011; organism=Citrus clementina; type=EST; length=682bp
CAGTACAGCGCGCACTCGGAACCTCCACTTGAATCAATCAGTCAACTGAC
AACGACTTAGATTTTTTATATCTACACTGTACAGTTCGGACTCGTTTCTA
TTCTATGAGGCATTTAGCACGGCGAAAGTCAAGGGAGTGAGTGTTTGTTT
GTTTTCGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGA
GCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCG
AAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGC
CACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGT
ACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAG
AAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTAT
AAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATG
AAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAAT
GAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCC
AGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTA
TCTTCAGGCGTCCTCAGGGTCTATACATAAGT
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