CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12612 contig Ccv1_Contig12612:1433..2102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.948e-107
Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP +   ALVAKFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFK 605          

HSP 2 Score: 25.7942 bits (55), Expect = 2.948e-107
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDE 649
            +KLHEDLTAGF     L+DE
Sbjct:  605 KKLHEDLTAGFR---ALEDE 621          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 7.722e-104
Identity = 187/197 (94.92%), Postives = 190/197 (96.45%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+ AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP +    LV KFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFK 605          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 374.4 bits (960), Expect = 8.608e-104
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIKHR+GDLFYRLVSQKFEDP +   ALV +F+
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQ 605          

HSP 2 Score: 24.6386 bits (52), Expect = 8.608e-104
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDE 649
            QKLHEDL+ GF     L+DE
Sbjct:  605 QKLHEDLSTGFR---NLEDE 621          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 1.605e-102
Identity = 184/197 (93.40%), Postives = 190/197 (96.45%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+Y+LIKHRLGDLFYRLVSQKFEDP +    LV KFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFK 605          

HSP 2 Score: 23.8682 bits (50), Expect = 1.605e-102
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDE 649
            +KLH+DLT+GF     L+DE
Sbjct:  605 KKLHDDLTSGFR---NLEDE 621          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 4.650e-102
Identity = 184/197 (93.40%), Postives = 189/197 (95.94%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+YTLIKHRLGDLFYRLVSQKFEDP +    LV KFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFK 605          

HSP 2 Score: 23.8682 bits (50), Expect = 4.650e-102
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDE 649
            +KLH+DLT+GF     L+DE
Sbjct:  605 KKLHDDLTSGFR---NLEDE 621          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 1.925e-100
Identity = 183/197 (92.89%), Postives = 188/197 (95.43%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNI+HF  LANQAVEK AGMDGQKITY+LIKHRLGDLFYRLVSQKFEDP +   ALVAKFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFK 605          

HSP 2 Score: 23.0978 bits (48), Expect = 1.925e-100
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDE 649
            +KL+EDLTAGF     L+DE
Sbjct:  605 KKLNEDLTAGFR---ALEDE 621          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.276e-98
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHF  LANQAVE+ AG DG KITY++IKHRLGDLFYRLVSQKFEDP +   ALV KFK
Sbjct:  347 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFK 543          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 3.712e-98
Identity = 180/197 (91.37%), Postives = 187/197 (94.92%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYS ALESFYE+FD +FI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITL+TAKLLREDYLAQNAFT YDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIK RLGDLFYRLVSQKFEDP +   ALVAKFK
Sbjct:  409 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDSEFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLREDYLAQNAFTAYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFK 605          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.948e-94
Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP-QKRTALVAKFK 593
            IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALE +YE+FDP FI++RTKAREVLQREDDLNEIVQLVGKDAL E DKITLETAKLLREDYLAQNAFTPYDK+CPFYKSVWMMRNIIHF  LANQAVE+ A  DG KITY ++K R+GDLFYRLVSQKFEDP +    LVAKF+
Sbjct:  366 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALEGYYEKFDPGFIDMRTKAREVLQREDDLNEIVQLVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQAVERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQ 562          

HSP 2 Score: 24.6386 bits (52), Expect = 1.948e-94
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  590 QKLHEDLTAGFAPRDELDDEGQ 655
            QKL++DLTAGF     L+DE +
Sbjct:  562 QKLYDDLTAGFR---NLEDEAR 580          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 8.597e-79
Identity = 144/194 (74.23%), Postives = 164/194 (84.54%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALV 581
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  ALE FYE+FD DF+ +R  AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA+ L+EDYL QN+FT YDK+CPFYKSV MMRNI+ F+ LA QA+E+ A   +DGQKIT+ +IK +LGDL Y++ SQKFEDP     +V
Sbjct:  397 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYLNALEPFYEKFDSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVV 590          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_CITUN2.948e-10797.46V-type proton ATPase catalytic subunit A OS=Citrus... [more]
VATA_ARATH7.722e-10494.92V-type proton ATPase catalytic subunit A OS=Arabid... [more]
VATA_PHAAU8.608e-10493.91V-type proton ATPase catalytic subunit A OS=Phaseo... [more]
VATA_BRANA1.605e-10293.40V-type proton ATPase catalytic subunit A OS=Brassi... [more]
VATA_DAUCA4.650e-10293.40V-type proton ATPase catalytic subunit A OS=Daucus... [more]
VATA_GOSHI1.925e-10092.89V-type proton ATPase catalytic subunit A OS=Gossyp... [more]
VATA_MAIZE1.276e-9890.86V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA_BETVU3.712e-9891.37V-type proton ATPase catalytic subunit A OS=Beta v... [more]
VATA_HORVU1.948e-9485.79V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA1_ACEAT8.597e-7974.23V-type proton ATPase catalytic subunit A isoform 1... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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