CX295045

Overview
NameCX295045
Unique NameCX295045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 2.627e-103
Identity = 180/241 (74.69%), Postives = 205/241 (85.06%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLA-DAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            LTFTFPE++ TS+G PFWSAPKRFPRP++FS  D S L F++AA+ILRAET+GIPIP+W K+P KLA +AV+KVIVPDFQPK+ VKI T EKATS+S+ S+DDA VI              P+G+ MNPIQFEKDDDTNFHMD+IAG ANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW
Sbjct:  720 LTFTFPEDSMTSSGAPFWSAPKRFPRPVEFSSSDQSQLSFILAAAILRAETFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 960          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 4.481e-103
Identity = 180/241 (74.69%), Postives = 205/241 (85.06%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLA-DAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            LTFTFPE++ TS+G PFWSAPKRFPRP++FS  D S L F++AA+ILRAET+GIPI +W K+P KLA +AV+KVIVPDFQPK+ VKI TDEKATS+S+ S+DDA VI              P+G+ MNPIQFEKDDDTNFHMD+IAG ANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK  KHQ++SWTVWDRW
Sbjct:  720 LTFTFPEDSMTSSGAPFWSAPKRFPRPVEFSSSDPSQLSFILAAAILRAETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRW 960          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.948e-98
Identity = 173/240 (72.08%), Postives = 195/240 (81.25%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            LTFTFPE+A TS G PFWSAPKRFPR LQFS  D SHL F+M+ASILRAE++G+ IP+W K   KLAD VNK+ VP F+PK+ V I TDEKA+++S+ S+DD  VI                G++M PIQFEKDDDTNFHMDLI+GLANMRARNY IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKV+ G H +EDYRNTFANLALPLFSMAEPVPPKV KH++ SWTVWDRW
Sbjct:  723 LTFTFPEDAATSMGAPFWSAPKRFPRALQFSAADQSHLNFIMSASILRAESFGVAIPEWAKDTSKLADVVNKIAVPTFEPKQGVNIVTDEKASNLSSTSVDDVAVIEDLLAKLQEYAKMLLPGFQMKPIQFEKDDDTNFHMDLISGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDRW 962          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 1.727e-54
Identity = 108/240 (45.00%), Postives = 146/240 (60.83%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP +  TS+G PFWS PKR P PL F V++  HL ++MAA+ L A+TYG+      +    +A  +  V VP+F PK  VKI   ++    +  S+DD+ +                 G+KM PI FEKDDD+NFHMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+
Sbjct:  725 LLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNPLHLDYVMAAANLFAQTYGLT---GSQDRAAVATFLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLP---GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPSADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.847e-54
Identity = 108/240 (45.00%), Postives = 144/240 (60.00%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP +  TS+G PFWS PKR P PL F V +  HL ++MAA+ L A+TYG+      +    +A  +  V VP+F PK  VKI   ++    +  S+DD+ +                 G+KM PI FEKDDD+NFHMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G   L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+
Sbjct:  725 LLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVMAAANLFAQTYGLA---GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLP---GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.847e-54
Identity = 108/240 (45.00%), Postives = 144/240 (60.00%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP +  TS+G PFWS PKR P PL F V +  HL +++AA+ L A+TYG+      +    +A  +  V VP+F PK  VKI   ++    +  S+DD+ +                 G+KM PI FEKDDDTNFHMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L  Y+N F NLALP F  +EP+     ++ +  WT+WDR+
Sbjct:  725 LLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVIAAANLFAQTYGLT---GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPEKLP---GFKMYPIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLNSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.562e-54
Identity = 107/240 (44.58%), Postives = 145/240 (60.42%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP +  TS+G PFWS PKR P PL F V++  HL ++MAA+ L A+TYG+      +    +A  +  V VP+F PK  VKI   ++    +  S+DD+ +                 G+KM PI FEKDDD+NFHMD I   +N+RA NY I   D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+
Sbjct:  725 LLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLT---GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLP---GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_MOUSE (Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.562e-54
Identity = 107/240 (44.58%), Postives = 145/240 (60.42%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP +  TS+G PFWS PKR P PL F V++  HL ++MAA+ L A+TYG+      +    +A  +  V VP+F PK  VKI   ++    +  S+DD+ +                 G+KM PI FEKDDD+NFHMD I   +N+RA NY I   D+ K+K IAG+IIPAIAT+TA   GLVCLELYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR+
Sbjct:  725 LLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLT---GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRLEELKATLPSPDKLP---GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.257e-53
Identity = 109/241 (45.23%), Postives = 148/241 (61.41%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKAT-SMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDRW 720
            L   FP    TS+G  FWS PKR P PL F +++  HL ++MAA+ L A+TYG+      +    +A  +  + VP F PK  ++I   E+   S S  +IDD+   +               G+KM PI FEKDDD+NFHMD I   +N+RA NYGI   D+ K+K IAG+IIPAIAT+T+   GLVCLELYKV+ G  +LE Y+N+F NLALPLFS + P+ P+  ++ D  WT+WDR+
Sbjct:  724 LLHNFPPAQLTSSGALFWSGPKRCPHPLTFDINNPLHLDYVMAAANLFAQTYGL---GGSQDCAVVAKLLQSLPVPKFAPKSGIRIHVSEQELQSTSATTIDDS---HLEELKTALPTPDKLLGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLESYKNSFINLALPLFSFSAPLAPECHQYYDQEWTLWDRF 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.301e-49
Identity = 109/244 (44.67%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSID---DAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPV-PPKVFKHQDMSWTVWDRW 720
            L + FP++  T+ GTPFWS PKR P PL+F V++  HL+F++AA+ LRA  YGI     ++   K A     VIVPDF PK+ VKI+T E   + S+ +     DA                   GYK+N IQFEKDDDTN H+D I   +N+RA NY I   DK K K IAG+IIPA+ T+TA+  G VC+EL KV+     LE Y++TF NL +P F   EP+  PK    +  +WT+WDR+
Sbjct:  684 LLYNFPKDMVTTTGTPFWSGPKRAPTPLKFDVENPLHLEFIVAAANLRAFNYGIKAETNIEVIQKQAA---NVIVPDFTPKK-VKIQTSENEPAPSSNTQQAGGDAEDDQCDTILSQLPQPSEMAGYKINSIQFEKDDDTNHHIDFITATSNLRATNYAISPADKHKTKGIAGKIIPALVTTTAVVAGFVCIELIKVIQ-NKALEKYKSTFMNLGIPFFGFVEPIAAPKNKIREGWTWTLWDRF 922          
The following BLAST results are available for this feature:
BLAST of CX295045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBE11_WHEAT2.627e-10374.69Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE12_WHEAT4.481e-10374.69Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE13_WHEAT1.948e-9872.08Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_HUMAN1.727e-5445.00Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_RABIT3.847e-5445.00Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA1_BOVIN3.847e-5445.00Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBA1_RAT6.562e-5444.58Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]
UBA1_MOUSE6.562e-5444.58Ubiquitin-like modifier-activating enzyme 1 OS=Mus... [more]
UBA1Y_MOUSE3.257e-5345.23Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_DICDI8.301e-4944.67Ubiquitin-like modifier-activating enzyme 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC05068A04SK DroRLeaf1 Citrus clementina cDNA clone C05068A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295045 ID=CX295045; Name=CX295045; organism=Citrus clementina; type=EST; length=727bp
TTGACATTTACTTTTCCTGAGAATGCTACAACCAGCAACGGGACACCCTT
CTGGTCAGCCCCCAAGCGTTTCCCCCGCCCTTTGCAGTTCTCAGTTGATG
ATCTCAGTCACCTTCAATTTTTGATGGCAGCATCAATATTACGAGCTGAA
ACATATGGCATTCCTATCCCTGATTGGGTCAAGTCACCCGTAAAGCTAGC
TGATGCTGTTAACAAAGTGATAGTCCCTGATTTCCAGCCCAAGGAAAATG
TAAAGATTGAGACAGATGAGAAAGCCACAAGTATGTCCACTGGATCAATT
GATGATGCTGTAGTAATCAATGAGTTGCTCCAAAAGTTAGAAAAATGCCA
GAAGCAGCTGCCAACAGGTTACAAGATGAACCCAATCCAGTTTGAAAAGG
ATGATGATACAAACTTTCACATGGACTTAATAGCTGGCCTTGCAAACATG
AGGGCAAGGAACTATGGCATCCCTGAAGTTGACAAGCTCAAGGCCAAGTT
CATTGCAGGGAGGATTATCCCAGCAATCGCAACCTCTACTGCCATGGCAA
CTGGTCTTGTGTGCTTGGAGCTTTATAAGGTTCTAGATGGTGGGCACAAA
CTGGAAGACTACCGAAATACCTTTGCCAATCTGGCCCTCCCTCTGTTCTC
GATGGCTGAGCCAGTTCCACCTAAGGTGTTCAAGCATCAGGATATGAGCT
GGACTGTGTGGGACCGGTGGATTTTGC
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