CX295052

Overview
NameCX295052
Unique NameCX295052
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295052 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 2 
Query:  557 VVASMYWLEVIKYRGVVSAQAHHEEII*DLYKSIQDPQKGLVHGGNIREH 706
            VVASM W E+ KYRG+VSAQAH EEII DLYK +QDPQ+GLVH G IREH
Sbjct:  738 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREH 787
The following BLAST results are available for this feature:
BLAST of CX295052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGOL_ARATH3.073e-1476.00Argonaute-like protein At2g27880 OS=Arabidopsis th... [more]
back to top
Properties
Property NameValue
Genbank descriptionC05068A11SK DroRLeaf1 Citrus clementina cDNA clone C05068A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295052 ID=CX295052; Name=CX295052; organism=Citrus clementina; type=EST; length=739bp
GAGGGTCCATGTTCTTTCAATCTGAATTATGGAGCATTAGCCTAAATGTG
GCAAAGGAATTTCCTTAACCGTGGACAACCTCCTTGATGGAAATGTGGGT
AGAGGATTTCATGCTGGAGAGTTAATTGAGTTCTAAATAAGCTATTGTCT
AAATCTTAATGAGTCATGCTTAAATATGCTATAAGAGGTTGGCTGAGTTG
TAAATAAGCTATTGTCTAAATCCTAATGAGTCATGCTTAAATATGATATA
AGAGGTTGGTCTCGGCTAAGACGAAGATTTATCTGTCTGGTACAGACTAT
AATCTAAGGCAACTGTTCAGTGGTTAATATTTCTTAAATTCTTTTGCTTA
TTCATTTGTTTTTTGAACTCTTTGGATGGTGGTAGTTCATTGTCATACAG
TATTAAGAGGAAGATGACTTCATGAGCAATTTATATCAAAAGTTGGAAAA
AGAAATGCACAAAATGGTGGCAGTCTTTTCAAACGAAATGGGAACAACTG
CAAAGGCTCAAGTGAATAGTTTAATGAAGCTGTTGAAAGTGCTGGGCTAA
ACCGAGGTGGTGGCCTCGATGTATTGGCTAGAAGTAATCAAGTACAGAGG
AGTTGTCTCTGCTCAGGCGCACCATGAGGAAATTATCTGAGATCTCTATA
AATCTATTCAAGATCCTCAGAAAGGTTTAGTTCATGGAGGAAATATCAGG
GAGCATGATCTACTGCCATCAGCTTACTACAATCATTAA
back to top