CX295072

Overview
NameCX295072
Unique NameCX295072
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15257 contig Ccv1_Contig15257:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295072 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45
Identity = 94/223 (42.15%), Postives = 141/223 (63.23%), Query Frame = 2
Query:   23 IPFAFILLLSYDCWVTFANIHATSSVLDDHYDDNLFLDCLSMHSDNASS-ISEVIYTKSHSSYSSVLNFSIQNFRFSTPNTPKPQVIVTPSDVSQVQAAIKCSQKHGLEVRIRSGGHDFEGLSFVSEVPFVIIDMLNLSEISVDAEEQTAWVQAGATLGQLYYRIAEKSKNLGFPGGLCPTVXXXXXXXXXXXXVMLRKFGLAADNIVDAHLIDAKGRFLDRK 688
            +PF F  LL     +  ++   ++SV       N FL C S  + +  S I++ ++++++ ++SSVL   I+N RF+T +T KP +I+TP   S V AA+ CS+     ++IRSGGHD++GLS++S+ PF I+DM N+ ++SVD    +AW+ AGATLG++YYRI EKS+  GFP G+CPTV             M+RKFGL+ D + DA ++D  GR LDRK
Sbjct:   12 VPFFFFFLLFLS--LPLSSFSQSNSVY------NSFLKCFSDKTKSPQSQITDNVFSQTNPAFSSVLRAYIRNARFNTSSTLKPTIIITPRSESHVSAAVTCSKTLNFLLKIRSGGHDYDGLSYISDKPFFILDMSNIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRK 226          
BLAST of CX295072 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.380e-42
Identity = 85/192 (44.27%), Postives = 122/192 (63.54%), Query Frame = 2
Query:  116 DDNLFLDCLSMHS-DNASSISEVIYTKSHSSYSSVLNFSIQNFRFSTPNTPKPQVIVTPSDVSQVQAAIKCSQKHGLEVRIRSGGHDFEGLSFVSEVPFVIIDMLNLSEISVDAEEQTAWVQAGATLGQLYYRIAEKSKNLGFPGGLCPTVXXXXXXXXXXXXVMLRKFGLAADNIVDAHLIDAKGRFLDRK 688
            +DNL   CL+ H   N +++S    T ++S Y  +L+ S+QN  F+ P   KP  IV P    ++ + + C  +    +R+RSGGH +EGLS+ ++ PFVI+DM+NL+ IS+D   +TAWV++GATLG+LYY IA+ +  LGF  G CPTV            +M RK+GLAADN+VDA LID+ G  LDR+
Sbjct:   27 NDNLLSSCLNSHGVHNFTTLS----TDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHISGGGFGMMSRKYGLAADNVVDAILIDSNGAILDRE 214          
BLAST of CX295072 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41
Identity = 86/206 (41.75%), Postives = 120/206 (58.25%), Query Frame = 2
Query:   71 FANIHATSSVLDDHYDDNLFLDCLSMHSDNASSISEVIYTKSHSSYSSVLNFSIQNFRFSTPNTPKPQVIVTPSDVSQVQAAIKCSQKHGLEVRIRSGGHDFEGLSFVSEVPFVIIDMLNLSEISVDAEEQTAWVQAGATLGQLYYRIAEKSKNLGFPGGLCPTVXXXXXXXXXXXXVMLRKFGLAADNIVDAHLIDAKGRFLDRK 688
            F ++    S+L+     N  L CL+    N      V    S S ++  L+ SIQN  F      KP  I+ P    ++   I+C +K    +R+RSGGH +EGLS+ S+ PF++ID++NL+ +S+D E +TAWV++G+TLG+LYY I E S  LGF  G CPTV            +M RK+GLAADN+VDA LIDA G  LDR+
Sbjct:    8 FFSLSIFLSLLNCALGGNDLLSCLTF---NGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQ 210          
The following BLAST results are available for this feature:
BLAST of CX295072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RETOL_ARATH6.618e-4542.15Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO1.380e-4244.27Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA9.889e-4141.75Reticuline oxidase OS=Eschscholzia californica GN=... [more]
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Properties
Property NameValue
Genbank descriptionC05068C07SK DroRLeaf1 Citrus clementina cDNA clone C05068C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295072 ID=CX295072; Name=CX295072; organism=Citrus clementina; type=EST; length=689bp
AGGGTCTTCTTGCACTTCTATCATCCCATTTGCTTTTATTCTTCTTTTAT
CGTATGATTGCTGGGTTACTTTTGCCAACATTCATGCAACTTCTTCAGTG
CTTGATGATCATTACGATGATAATTTATTTCTTGATTGCCTTTCTATGCA
CTCTGATAACGCCTCCTCCATTTCCGAAGTGATTTACACAAAAAGCCATT
CTTCTTATTCATCCGTCTTGAATTTTTCCATACAAAACTTCAGGTTCTCA
ACACCCAACACCCCCAAACCTCAAGTCATTGTCACGCCATCAGACGTATC
CCAGGTTCAAGCAGCCATTAAATGTTCTCAAAAGCATGGCTTGGAGGTTA
GGATTCGAAGTGGTGGCCATGACTTTGAGGGTCTATCTTTTGTTTCTGAG
GTCCCGTTCGTCATCATTGATATGCTAAATCTTAGTGAAATCAGTGTTGA
TGCAGAGGAGCAAACAGCTTGGGTTCAAGCAGGCGCCACCCTTGGCCAAC
TTTATTACAGAATTGCTGAGAAAAGTAAAAATCTTGGCTTTCCAGGCGGA
CTTTGCCCTACTGTTGGGGCTGGTGGACATATTAGTGGTGGAGGATATGG
GGTCATGTTGCGTAAATTTGGCCTTGCTGCCGATAACATCGTTGACGCAC
ACTTGATTGACGCCAAAGGTAGATTTCTTGATAGAAAAT
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