CX295078

Overview
NameCX295078
Unique NameCX295078
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295078 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.849e-31
Identity = 85/217 (39.17%), Postives = 122/217 (56.22%), Query Frame = 1 
Query:    1 SLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXXXXSSLCQMGIKV--ATICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLT 642
            S AS P+      ++ +L  +WPFT  C +L  W + +TF+    TL     QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL  LN+ E LN  G +++ + P+ L+++VV G++L AAV++  +PK    V L G              LC+ G++V   T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT
Sbjct:  320 SFASMPYT-----TRIFLLPMWPFTF-CVMLGMWAWSKTFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALNKNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATSKLGRAIALY--LCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLT 527
The following BLAST results are available for this feature:
BLAST of CX295078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH4.849e-3139.17Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC05068D01SK DroRLeaf1 Citrus clementina cDNA clone C05068D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295078 ID=CX295078; Name=CX295078; organism=Citrus clementina; type=EST; length=646bp
TCCTTGGCATCAAAGCCCCATCGCTATACCTATACATTATCACAGTGGTA
TCTACAGCTGTTGTGGCCTTTCACAGCTTCTTGTTCTGTCCTTGTGAGTT
GGATCTATGGCCGGACTTTTGTTTCAGAGAGCAACACTTTGGACAAACTC
AAATTGCAAACCTGGGTGGTACCAAGGTACATTGTGCAATATAACTTGCC
ATGGAGAAGAGAAGCTATTAATAGCTTGATAGAAGAAGCCATATTAGAAG
CAGATGCGAAAGGGGTAAAAGTTATAAGTCTAGGGCTTCTGAATCAGGGA
GAGGAGCTTAACAGAAACGGAGAGATATACCTGGAAAGACAACCTAATAA
GCTAAAAATCAAAGTGGTGGACGGAAGTAGCTTGGCAGCGGCGGTTGTGG
TGAACAGCTTACCAAAAACCACGGCCCACGTGCTTCTTAGAGGCACTGTT
ACGGCCAATAAGGTCGCTAACGCAGTTGCCTCATCTCTATGCCAAATGGG
CATCAAGGTGGCCACGATATGCAAGGACGATTATGAGAAGCTTAAGCTCA
GGATCCCTGTGGAAGCTCAACATAATTTGGTCCTGTCAACAAGTTACGCT
GCTCACAAGACGAAGATTTGGTTAGTGGGAGACGATTTGACAGGAA
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