CX295086

Overview
NameCX295086
Unique NameCX295086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2654 contig Ccv1_Contig2654:66..825. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.528e-35
Identity = 67/104 (64.42%), Postives = 88/104 (84.62%), Query Frame = 3
Query:   54 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            DVK+LG   SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKI 108          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.140e-34
Identity = 64/108 (59.26%), Postives = 87/108 (80.56%), Query Frame = 3
Query:   54 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEKVQ 368
            ++K+LG W SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+KV+
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVR 113          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.387e-33
Identity = 64/104 (61.54%), Postives = 82/104 (78.85%), Query Frame = 3
Query:   54 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            +V +L  WPS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K+
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKL 108          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.387e-33
Identity = 64/104 (61.54%), Postives = 82/104 (78.85%), Query Frame = 3
Query:   54 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            +V +L  WPS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K+
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKL 108          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.271e-33
Identity = 68/104 (65.38%), Postives = 86/104 (82.69%), Query Frame = 3
Query:   51 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 362
            ++VK+LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K
Sbjct:    2 AEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDK 103          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33
Identity = 66/105 (62.86%), Postives = 86/105 (81.90%), Query Frame = 3
Query:   51 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            ++VK+LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+KV
Sbjct:    2 AEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.616e-32
Identity = 64/105 (60.95%), Postives = 85/105 (80.95%), Query Frame = 3
Query:   51 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            ++VK+LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+KV
Sbjct:    2 AEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.416e-32
Identity = 63/105 (60.00%), Postives = 85/105 (80.95%), Query Frame = 3
Query:   51 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            ++VK+LG W SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +KV
Sbjct:    2 AEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKV 104          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.892e-31
Identity = 63/105 (60.00%), Postives = 80/105 (76.19%), Query Frame = 3
Query:   51 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            ++V +L  WPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K+
Sbjct:    4 NNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKI 107          
BLAST of CX295086 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.099e-30
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 3
Query:   54 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 365
            +V +L  W S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K+
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKI 106          
The following BLAST results are available for this feature:
BLAST of CX295086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN2.528e-3564.42Probable glutathione S-transferase OS=Glycine max ... [more]
GSTU6_ORYSJ2.140e-3459.26Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTXC_TOBAC1.387e-3361.54Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC1.387e-3361.54Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU5.271e-3365.38Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_TOBAC8.991e-3362.86Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.616e-3260.95Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC3.416e-3260.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC2.892e-3160.00Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_SOYBN1.099e-3058.65Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]

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Properties
Property NameValue
Genbank descriptionC05068D10SK DroRLeaf1 Citrus clementina cDNA clone C05068D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295086 ID=CX295086; Name=CX295086; organism=Citrus clementina; type=EST; length=759bp
GATTCGGCCGAGGCAGAGCTTAGAGAAAAAAAAAAAAGAAAATGGCAAAA
AGCGACGTGAAGGTTTTGGGTGCGTGGCCAAGCCCATTTGTGATGAGGGC
AAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTTTCTGGAGGAGA
ATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCACAAG
AAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCTCAT
CATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTATTC
TTCCTTCTGATCCTTATGACCGTGCCGTTGCTCGTTTCTGGGCCGCTTAT
GTTGATGAGAAGGTACAGTTTCCTTTCTTTGTTTTGAAAAAAATGTTTTA
AGTCAATTCTTTTTATTCGAATTATGTGCATCTAAAAATTTTTAATCTTT
TTCAGTTTTGAAAACTGTTTTCGGAAATTAATAAAGTCTCTCTTGGTAAA
TCAAGGAGGTAAAGTGCGTGATTGGAATTATTTCCGGTGGAAAAATGAAC
TTGAAAAGAAAACTAAAGAAAGATTAAGAAAGCAGAGCCCAAGAGGAAAA
CAATCAATAGAATCTGGAAGTTTGATTTTTCATAAAACGGGCTTTCTAGA
GACCCCCAATAACCAATTCTCTCATCAATTGCTAAGCAGTACTTTCAAGT
CTCTCAACTCCCGAGCCTCCTAAGCCTTGTCCTTAAATTATCGTTCGACA
AATCGAACG
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