CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11232 contig Ccv1_Contig11232:555..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS6_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2)

HSP 1 Score: 411.764 bits (1057), Expect = 1.826e-114
Identity = 203/234 (86.75%), Postives = 222/234 (94.87%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSS-PKKSMLVV 699
            +LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLP TE KV ELI+++  +G+ MLLGVDDMDIFKGI+LKLLAMEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+TFG+PGYDP+VLID PLKFYER+AYYVVAECCLVTAVRDGMNLIPYEYI+SRQGNEKLDK+L  E ++  KKSMLVV
Sbjct:  256 LLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKLEANNRNKKSMLVV 489          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2)

HSP 1 Score: 373.629 bits (958), Expect = 5.510e-103
Identity = 186/233 (79.83%), Postives = 212/233 (90.99%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSMLVV 699
            +LRALLN+DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG IGLEYYGRTVSIKILPVGIH+ QLQS+L+LP T+ KV+EL  QF DQ   +LLGVDDMDIFKGISLKLLAMEQLL QHPE +G+VVLVQIANPARGRGKDV+EVQ+ET +TV+RIN+ FG+PGY PVVLID PL+F+ERIAYYV+AECCLVTAVRDGMNLIPYEYII RQGN KL++ +G +PS+ KKSMLVV
Sbjct:  248 LLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQK--VLLGVDDMDIFKGISLKLLAMEQLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVV 478          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS9_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.326e-85
Identity = 154/233 (66.09%), Postives = 188/233 (80.69%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSMLVV 699
            +LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV IKILPVGIHMG+L+SVL+LP T AK+ E+ +QF  +GK ++LGVDDMDIFKGISLKL+AME+L   +   +GK+VL+QI NPAR  GKDV+E + ETYST +RIN+ +G  GY PV+LID  +  YE+ AYY +A+CCLV AVRDGMNL+PY+YII RQG   +DK +G    S + SMLVV
Sbjct:  248 LLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQF--KGKKLILGVDDMDIFKGISLKLIAMERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVV 478          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS7_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.728e-84
Identity = 157/234 (67.09%), Postives = 185/234 (79.06%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEP--SSPKKSMLV 696
            IL+ALLNSDLIGFHTFDYARHFL+CCSRMLGL Y+SKRGYIGLEYYGRTV IKI+PVGI+MG++QSV+     E KV EL  +F  +GK +LLG+DDMDIFKGI+LKLLAMEQ+L QHP W+G+ VLVQI NPARG+G DV+E++ E   +  RIN  FGKPGY P++ ID P+   E  AYY +AEC +VTAVRDGMNL PYEYI+ RQG      +LGSE   S PKKSMLV
Sbjct:  246 ILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGINMGRIQSVMRYSEEEGKVMELRNRF--EGKTVLLGIDDMDIFKGINLKLLAMEQMLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLV 471          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS10_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 145/233 (62.23%), Postives = 184/233 (78.97%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSMLVV 699
            +LR LLN DLIGFHTFDYARHFLSCC RMLGL YESKRG+I L+Y GRTV +KILP+GIHMG+L+SVL+LP T  K+ E+ +++  +GK ++LGVDDMDIFKG+SLK+LA E LL Q+P   GK+VL+QI NPARG GKDV+E + ETY TV+RIN+ +G   Y+PVVLID P+  +E+ AYY +AECC+V AVRDGMNL+PY+Y + RQG   ++K LG     P+ S LV+
Sbjct:  248 LLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIHMGRLESVLNLPATAEKLKEIQEKY--RGKKIILGVDDMDIFKGLSLKILAFEHLLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVL 478          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS8_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.253e-79
Identity = 150/233 (64.38%), Postives = 178/233 (76.39%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSMLVV 699
            ILR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV IKILPVG+HMG+L+SVLSL  T AK  E+ +QF  +GK ++LG+DDMDIFKGISLKL+AME L   +   +GKVVLVQI NPAR  GKDV+E + ETY T  RIN+ +G   Y P+VLID  +   E+ AYY  A+CCLV AVRDGMNL+PY+YI+ RQG      V+    SSP+ S LVV
Sbjct:  246 ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLSLDSTAAKTKEIQEQF--KGKKLVLGIDDMDIFKGISLKLIAMEHLFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVV---DSSPRTSTLVV 473          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS11_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.499e-76
Identity = 138/234 (58.97%), Postives = 179/234 (76.50%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP-GYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSMLVV 699
            IL+  LN DL+GFHTFDYARHFLSCCSRMLGL YESKRGYIGLEY+GRTVSIKILPVGIHMGQ++S+ +   T  KV  L ++F  +G +++LGVDD+D+FKGISLK  AM QLL Q+ E +GKVVLVQI NPAR  GKDV++V+ +     + IN  FG+P GY P+V I+ P+   +++AYY ++EC +V AVRDGMNL+PY+Y ++RQG+  LD  LG      +KS+++V
Sbjct:  239 ILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERF--KGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIV 470          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_SCHPO (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe GN=tps1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 7.833e-41
Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 630
            IL  +LN DL+GFHT+DYARHFLS CSR+L L+        G+EY G+ VS+   P+GI   +    L     + +++ + ++   QG  +++GVD +D  KG+  K  A E  L Q+PEW GKVVLVQ+A P+R   ++ + ++A     V RIN  FG   Y P+  + + ++F E +A Y V++ CL+T+ RDGMNL+ YEYI ++Q
Sbjct:  204 ILEGVLNCDLVGFHTYDYARHFLSACSRILNLSTLPN----GVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRL--QGVKVIVGVDRLDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQ 407          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPSB_ASPNG (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Aspergillus niger GN=tpsB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.023e-40
Identity = 86/210 (40.95%), Postives = 129/210 (61.43%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 630
            +LR +L  DLIGFHT+DYARHFLSCCS +LGL          +++  R+V++   P+GI   +    L  P  + +++ L  +F  QG  +++ VD +D  KGI  KL A+E  L QHPEW GKVVLVQ+A P+R   ++ + ++A     V RIN  FG   Y P+  + + + F E IA Y  ++ C+V++ RDGMNL+ +EY+ ++Q
Sbjct:  198 LLRGVLQCDLIGFHTYDYARHFLSCCSHILGLVTTPS----SVKFKDRSVAVGAFPIGIDPDKFTEGLKSPKVQNRIASLENKF--QGTKLMVSVDRLDYIKGIPQKLHALEVFLSQHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVDYMPIHFMHKSVSFDELIALYAASDACVVSSTRDGMNLVSFEYVATQQ 401          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPSA_ASPNG (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.976e-40
Identity = 85/210 (40.48%), Postives = 131/210 (62.38%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 630
            +L  +L+ DLIGFHT+DY RHFLS CSR+LGLT        G+E+ G+ ++    P+GI   + +  L     + +++ L ++F  QG  +++GVD +D  KG+  KL A+E  L  HPEW GKVVLVQ+A P+R   ++ + ++A     V RIN  FG   + P+  + + + F E IA Y V++ C+V++ RDGMNL+ YEYI +++
Sbjct:  198 LLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPN----GIEFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKF--QGVKLMVGVDRLDYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQK 401          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
TPS6_ARATH1.826e-11486.75Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS5_ARATH5.510e-10379.83Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS9_ARATH2.326e-8566.09Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS7_ARATH5.728e-8467.09Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS10_ARATH3.143e-8262.23Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS8_ARATH3.253e-7964.38Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS11_ARATH7.499e-7658.97Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS1_SCHPO7.833e-4141.43Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPSB_ASPNG1.023e-4040.95Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPSA_ASPNG2.976e-4040.48Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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