CX295093 | Citrus Genome Database

Overview


Name	CX295093
Unique Name	CX295093
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	713

Libraries


Library Name	Type
DroRLeaf1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 438.343 bits (1126), Expect = 1.859e-122
Identity = 204/235 (86.81%), Postives = 216/235 (91.91%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  F++ FDD+G+PQDYRHMEGSGVNTY LINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKL+IQ +DPDHEDKFDFDPLDVTKTWPEDILPL  VGRLV
Sbjct:   73 GFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDLGVPQDYRHMEGSGVNTYTLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLFIQTIDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.428e-122
Identity = 202/235 (85.96%), Postives = 218/235 (92.77%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  FS+ FDD+G+PQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLE+EAIKVGGANHSHAT+DLYDSIAAGNYPEWKL+IQI+DPDHED+FDFDPLDVTKTWPEDILPL  VGRLV
Sbjct:   73 GFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDLGVPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEEEAIKVGGANHSHATKDLYDSIAAGNYPEWKLFIQIIDPDHEDRFDFDPLDVTKTWPEDILPLQPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 436.032 bits (1120), Expect = 9.227e-122
Identity = 197/235 (83.83%), Postives = 215/235 (91.49%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+SHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+D++GN+ PVFFIRDAIKFPDVIHAFKPNPKSHIQE WRILDFCSH PESL TF+WF+DDVGIPQDYRHMEG GV++Y LINKAGK +YVKFHWKPTCGVKCL+EDEA+++GG NHSHATQDLYDSIAAGNYPEWKLY QIMDPD ED+FDFDPLD TK WPEDI+PL  VGR+V
Sbjct:   73 GFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSHIQESWRILDFCSHFPESLLTFAWFYDDVGIPQDYRHMEGFGVHSYTLINKAGKVNYVKFHWKPTCGVKCLMEDEAVRIGGTNHSHATQDLYDSIAAGNYPEWKLYFQIMDPDQEDRFDFDPLDTTKIWPEDIIPLIPVGRMV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 432.95 bits (1112), Expect = 7.812e-121
Identity = 200/235 (85.11%), Postives = 214/235 (91.06%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+SHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPDV+HAFKPNPKSH+QE WRI DF SH+PESL   ++  DD+GIPQDYRHMEGSGVNTY LINKAGK HYVKFHWKPTCGVKCLLE+EAIKVGG+NHSHATQDLYDSI+AGNYPEWKLYIQIMDP HEDKFDFDPLDVTKTWPEDILPL  VGRLV
Sbjct:   73 GFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDVVHAFKPNPKSHLQENWRIFDFLSHVPESLHMLTFLLDDLGIPQDYRHMEGSGVNTYTLINKAGKVHYVKFHWKPTCGVKCLLENEAIKVGGSNHSHATQDLYDSISAGNYPEWKLYIQIMDPAHEDKFDFDPLDVTKTWPEDILPLQPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 1.740e-120
Identity = 199/235 (84.68%), Postives = 216/235 (91.91%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  F++ FDD+G+PQDYRHMEGSGVNTY LINKAGKA YVKFHWKPTCGVKCLLEDEAIKVGGANHSHAT+DLYDSI+AGNYPEWKL+IQI++PDHEDKFDFDPLDVTKTWPEDI+PL  VGRLV
Sbjct:   73 GFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDLGVPQDYRHMEGSGVNTYTLINKAGKAQYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATKDLYDSISAGNYPEWKLFIQIIEPDHEDKFDFDPLDVTKTWPEDIIPLMPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.629e-118
Identity = 196/235 (83.40%), Postives = 210/235 (89.36%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D++ LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA KFYTREGN+D++GN+ PVFFIRD IKFPDV+HAFKPNPKSHIQEYWRI DFCSH PESLSTF+WFFDDVGIPQDYRHMEG GV+TY LINKAGK  YVKFHWKPTCGVKCL++DEAIKVGGANHSHATQDLYDSIAAGN+PEWKL IQ MDP  EDKF FDPLD+TK WPED+ PL  VGRLV
Sbjct:   73 GFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFATKFYTREGNFDIVGNNFPVFFIRDGIKFPDVVHAFKPNPKSHIQEYWRIFDFCSHHPESLSTFAWFFDDVGIPQDYRHMEGFGVHTYCLINKAGKVTYVKFHWKPTCGVKCLMDDEAIKVGGANHSHATQDLYDSIAAGNFPEWKLMIQTMDPADEDKFSFDPLDMTKIWPEDMFPLHPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 424.091 bits (1089), Expect = 3.629e-118
Identity = 197/235 (83.83%), Postives = 215/235 (91.49%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DIS+LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL+ F++ FDD+GIPQDYRHM+GSGVNTYMLINKAGKAHYVKFHWKPTCGVK LLE++AI+VGG NHSHATQDLYDSIAAGNYPEWKL+IQI+DP  EDKFDFDPLDVTKTWPEDILPL  VGR+V
Sbjct:   73 GFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFLFDDIGIPQDYRHMDGSGVNTYMLINKAGKAHYVKFHWKPTCGVKSLLEEDAIRVGGTNHSHATQDLYDSIAAGNYPEWKLFIQIIDPADEDKFDFDPLDVTKTWPEDILPLQPVGRMV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 6.189e-118
Identity = 195/235 (82.98%), Postives = 214/235 (91.06%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WR+LDF SH+PESL  F++ FDD+GIPQDYRHM+GSGV+T+ LINKAGK+ YVKFHWKPTCGVK LLEDEA +VGGANHSHATQDLYDSIAAGNYPEWKL+IQ MDPDHED+FDFDPLDVTKTWPEDILPL  VGRLV
Sbjct:   66 GFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRVLDFFSHVPESLHMFTFLFDDIGIPQDYRHMDGSGVHTFTLINKAGKSTYVKFHWKPTCGVKSLLEDEAARVGGANHSHATQDLYDSIAAGNYPEWKLFIQTMDPDHEDRFDFDPLDVTKTWPEDILPLQPVGRLV 300

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 8.084e-118
Identity = 189/235 (80.43%), Postives = 213/235 (90.64%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DI+HLTCAD  RAPGVQTP+IVRFSTVIHERGSPET+RDPRGFAVK YTR GNWDL+GN+ PVFFIRD  +FPDVIHAFKPNPKSHIQE WRILD+ SHLPESL+TF+WF+DDVGIP DYRHMEG GV+T+ +INK GKA+YVKFHWKPTCGVKCLLE+EAI++GG NHSHATQDLY+SIAAGNYPEWKLYIQ+MDPDHED+FDFDPLD TK WPE+++PL  VGR+V
Sbjct:   73 GFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQENWRILDYLSHLPESLNTFAWFYDDVGIPTDYRHMEGFGVHTFTMINKEGKANYVKFHWKPTCGVKCLLEEEAIRIGGENHSHATQDLYESIAAGNYPEWKLYIQVMDPDHEDRFDFDPLDTTKIWPEELIPLQPVGRMV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 4.012e-117
Identity = 194/235 (82.55%), Postives = 213/235 (90.64%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DIS LTCAD  RAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WRILDF SH PESL  F++ FDD+G+PQDYRHM+GSGV+TY LINKAGK+HYVKFHWKPTCGVK LLEDEAI+VGGANHSHATQDLYDSIAAGNYPEWKL+IQIMDP HED+FDFDPLDVTKTWPEDI PL  +GR+V
Sbjct:   73 GFFEVTHDISQLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDIGVPQDYRHMDGSGVHTYTLINKAGKSHYVKFHWKPTCGVKSLLEDEAIRVGGANHSHATQDLYDSIAAGNYPEWKLFIQIMDPLHEDRFDFDPLDVTKTWPEDIFPLQPMGRMV 307

The following BLAST results are available for this feature:

BLAST of CX295093 vs. ExPASy Swiss-Prot

BLAST of CX295093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142


Match Name	E-value	Identity	Description
CATA1_GOSHI	1.859e-122	86.81	Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P...	[more]
CATA3_NICPL	2.428e-122	85.96	Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN...	[more]
CATA_AVIMR	9.227e-122	83.83	Catalase OS=Avicennia marina PE=2 SV=1	[more]
CATA1_RICCO	7.812e-121	85.11	Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=...	[more]
CATA_SOLAP	1.740e-120	84.68	Catalase OS=Soldanella alpina PE=2 SV=1	[more]
CATA2_RICCO	1.629e-118	83.40	Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=...	[more]
CATA2_ARATH	3.629e-118	83.83	Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV...	[more]
CATA1_NICPL	6.189e-118	82.98	Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag...	[more]
CATA_IPOBA	8.084e-118	80.43	Catalase OS=Ipomoea batatas PE=2 SV=1	[more]
CATA2_GOSHI	4.012e-117	82.55	Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P...	[more]

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Properties


Property Name	Value
Genbank description	C05068E05SK DroRLeaf1 Citrus clementina cDNA clone C05068E05, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX295093 ID=CX295093; Name=CX295093; organism=Citrus clementina; type=EST; length=713bp
GTGCTAAGGGTTTCTTTGAGTGCCCCTCGATATTTCTCACCTTACTTGTG
CTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTC
TCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCG
AGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGG
GTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGAT
GTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTG
GAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTT
CCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAA
GGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAAGCACA
TTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTTATTGG
AAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTACTCAA
GATCTTTATGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTA
CATCCAGATTATGGATCCCGACCATGAGGACAAATTTGACTTTGACCCAC
TTGATGTAACCAAGACCTGGCCTGAGGACATCTTGCCCCTTGCAACTGTG
GGCCGGTTGGTTT