CX295095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 343.584 bits (880), Expect = 6.259e-94 Identity = 181/226 (80.09%), Postives = 197/226 (87.17%), Query Frame = 2 Query: 26 NQNQGQRVNY-----RRFAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 NQ QGQRV+Y RRF+VRA+ K+IAFDQ SRAA+QAGIDKL+D VGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL + MENAGAALIREVASKTNDSAGDGTTTAS+LAREIIK GLLSVTSGANPVSLKRGIDKTV GL+EEL+K+ARP++GRDDI+AVA+ISAGNDDLIG+MIADAIDKVGPDGVL GMEIDRGYISPQFVT Sbjct: 25 NQQQGQRVSYNKRTIRRFSVRANVKEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT 250
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 335.109 bits (858), Expect = 2.226e-91 Identity = 179/222 (80.63%), Postives = 192/222 (86.49%), Query Frame = 2 Query: 35 QGQRVNYR----RFAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 Q RVN+R RF V+A+AKDIAFDQ SR+AMQAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLL+VTSGANPVS+K+GIDKTV LVEELEK ARP++G DDIKAVATISAGND+LIG MIA+AIDKVGPDGVL GMEIDRGYISPQFVT Sbjct: 30 QHGRVNFRQKPNRFVVKAAAKDIAFDQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLNVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVLSIESSNSFETTVEVEEGMEIDRGYISPQFVT 251
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.226e-91 Identity = 179/225 (79.56%), Postives = 193/225 (85.78%), Query Frame = 2 Query: 26 NQNQGQRVNYR----RFAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 +Q +GQRV+YR RF++RA+ K+IAFDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKR+RP++G DIKAVATISAGND+LIG MIADAIDKVGPDGV GMEIDRGYISPQFVT Sbjct: 25 SQQKGQRVSYRKANRRFSLRANVKEIAFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRSRPVKGGRDIKAVATISAGNDELIGAMIADAIDKVGPDGVSPIESSSSFETTVEVEEGMEIDRGYISPQFVT 249
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 331.257 bits (848), Expect = 3.214e-90 Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 2 Query: 59 RFAVRASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 RF+VRA+ K+I+FDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKRARP++G DIKAVATISAGND+L+GTMIADAIDKVGPDGVL GMEIDRGYISPQFVT Sbjct: 1 RFSVRANVKEISFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARPVKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT 210
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.816e-86 Identity = 164/207 (79.23%), Postives = 183/207 (88.41%), Query Frame = 2 Query: 74 ASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTTL 694 A AK+IAFDQ SRAA+QAG++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIELA+PMENAGAALIREVASKTNDSAGDGTTTA VLAREIIKLG+LSVTSGANPVSLK+GIDKTV GL+EELE++ARP++G DIKAVA+ISAGND+LIG MIADAIDKVGPDGVL GMEIDRGYISPQFVT L Sbjct: 2 ADAKEIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGNPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIEELERKARPVKGSGDIKAVASISAGNDELIGAMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNL 208
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.384e-85 Identity = 163/193 (84.46%), Postives = 174/193 (90.16%), Query Frame = 2 Query: 110 RAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 R A+Q+GIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KRGIDKTV GL+EELEK+ARP++GRDDIKAVA+ISAGND+LIGTMIADAIDKVGPDGVL GMEIDRGYISPQFVT Sbjct: 1 RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT 193
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.445e-71 Identity = 139/213 (65.26%), Postives = 172/213 (80.75%), Query Frame = 2 Query: 56 RRFAVRAS-AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 RR +RA+ AK+I FDQ SR +QAGI+K++DAVG+TLGPRGRNVVL++ FG P+V+NDGV+I RAIEL DP+ENAGA LI+EVA +TND+AGDGTTTASVLARE+I GL SVT+GANP+++KRG+DKT LV +L++ A+P++GRDDIK VA+ISAGND+ IG MIADA+DKVG +GVL GMEIDRGYISPQFVT Sbjct: 27 RRLVIRAADAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADALDKVGSNGVLSIETSNSTETVVEVQEGMEIDRGYISPQFVT 239
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.135e-61 Identity = 119/204 (58.33%), Postives = 158/204 (77.45%), Query Frame = 2 Query: 80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 AK + FD+ SR A++ G++ L+DAV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ +EL DP+ENAGA L+REVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANPV+L++GIDKT+ LV+E+E +++P+ G D I VATISAGND +G MIA A+DKVG DGV+ GM+IDRGYISP FVT Sbjct: 2 AKHVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAG-DAIAQVATISAGNDTEVGQMIAQAMDKVGKDGVITVEESKSLATEMEIVEGMQIDRGYISPYFVT 204
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.720e-59 Identity = 117/204 (57.35%), Postives = 155/204 (75.98%), Query Frame = 2 Query: 80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 AK I FD+ +R A++ G++ L+DAV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL DP+EN GA LIREVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+SLKRG++KTV LV+E+ A+P+E I VATIS+GND+ IG MIA+A+DKVG +GV+ GM+ D+GY+SP FVT Sbjct: 2 AKMIVFDETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVITVEESKSLVTELDVVEGMQFDKGYVSPYFVT 205
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.005e-59 Identity = 115/204 (56.37%), Postives = 155/204 (75.98%), Query Frame = 2 Query: 80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688 AK I F + +R A++ GI++L+DA+ +T+GP+GRNVVL++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVASKTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT LVE++ A+P+EGR I VATISAGND +G MIA A+D VG DGV+ GM+ DRGYISP FVT Sbjct: 2 AKRILFREEARKALEQGINQLADAIKVTIGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVASKTNDVAGDGTTTATILAQSMVREGLKNISAGANPVALRRGIEKTTAYLVEQIAAHAKPVEGRKTIAEVATISAGNDSEVGEMIAKAMDAVGRDGVITVEESKSLETELDVVEGMQFDRGYISPYFVT 205 The following BLAST results are available for this feature:
BLAST of CX295095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295095 ID=CX295095; Name=CX295095; organism=Citrus clementina; type=EST; length=711bpback to top |