CX295096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.274e-57 Identity = 101/191 (52.88%), Postives = 117/191 (61.26%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKN------------------------------------------MKVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVL 613 R+ ELPPVDMFVTTAD EPP+I VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV++RAPF YF +DW+ +KV+ ENKGG+ D E+PH+VYISREKRP H HHYKAGAMN L Sbjct: 88 RVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF-RNSPEAAEGSEFSKDWEMTKREYEKLSQKVEDATGSSHWLDAEDDFEAFLNTKSNDHSTIVKVVWENKGGVGDEKEVPHVVYISREKRPNHFHHYKAGAMNFL 277 HSP 2 Score: 43.5134 bits (101), Expect = 2.274e-57 Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMY N ++V QAMC+ L S + N AF+Q PQ F Sbjct: 293 VDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDF 331 HSP 3 Score: 32.7278 bits (73), Expect = 2.274e-57 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P YKTYP+RL ER Sbjct: 72 KWSPADYKTYPERLDER 88
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.873e-56 Identity = 99/191 (51.83%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNM------------------------------------------KVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVL 613 R+ +LP VDMFV TAD EPPII VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF +DWK M KV+ ENKGG+ D E+PHLVYISREKRP + HHYK GAMN L Sbjct: 88 RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKTGAMNFL 277 HSP 2 Score: 53.1434 bits (126), Expect = 1.873e-56 Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMYAN P++V QAMC+ L SKN N AF+Q PQ F Sbjct: 293 VDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQNF 331 HSP 3 Score: 25.7942 bits (55), Expect = 1.873e-56 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P K YP RL ER Sbjct: 72 KWSPAEDKPYPNRLDER 88
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.007e-55 Identity = 95/191 (49.74%), Postives = 115/191 (60.21%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWK------------------------------------------NMKVISENKG--GLSDEIPHLVYISREKRPKHPHHYKAGAMNVL 613 R+ +LP VDMFVTTAD EPPI+ NT+LSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF +DW+ +KV+ ENKG G+ +E+PH VYISREKRP + HHYKAGAMN L Sbjct: 88 RVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYF-LNPPAATESSEFSKDWEITKREYEKLSRRVEDATGDSHWLDAEDDFEDFSNTKPNDHSTIVKVVWENKGGVGVENEVPHFVYISREKRPNYLHHYKAGAMNFL 277 HSP 2 Score: 47.3654 bits (111), Expect = 2.007e-55 Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMYAN ++V QAMC+ L S N N AF+Q PQ F Sbjct: 293 VDCDMYANEADVVRQAMCIFLQKSMNSNHCAFVQFPQEF 331 HSP 3 Score: 31.9574 bits (71), Expect = 2.007e-55 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P +YK+YP+RL ER Sbjct: 72 KWSPASYKSYPERLDER 88
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 6.956e-55 Identity = 104/226 (46.02%), Postives = 125/226 (55.31%), Query Frame = 2 Query: 80 LALIISASFAIVFVILQVXXXXXXXXCVRLN----RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNM------------------------------------------KVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVL 613 LA + F++V++I +N R+ +LP +DMFV TAD E PIITVNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV++RAPFRYF +DWK M KV+ ENKGG+ D E+PHLVYISREKRP + HHYK GAMN L Sbjct: 53 LAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF-LNPLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKTGAMNFL 277 HSP 2 Score: 53.1434 bits (126), Expect = 6.956e-55 Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMYAN P++V QAMC+ L SKN N AF+Q PQ F Sbjct: 293 VDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQKF 331
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 9.748e-55 Identity = 97/191 (50.79%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKN------------------------------------------MKVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVL 613 R+ +LP VDMFV TAD EPPI+ VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF +DW+ +KV+ ENKGG+ D E+PH+VYISREKRP + HHYKAGAMN L Sbjct: 88 RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYF-LNPFAATEGSEFSRDWEMTKREYEKLCRKVEDATGDSHLLGTDNELEAFSNTKPNDHSTIIKVVWENKGGVGDEKEVPHIVYISREKRPNYLHHYKAGAMNFL 277 HSP 2 Score: 48.9062 bits (115), Expect = 9.748e-55 Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMYAN ++V QAMC+ L S+N+N AF+Q PQ F Sbjct: 293 VDCDMYANEADVVRQAMCIFLQKSQNQNHCAFVQFPQEF 331 HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-55 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P K YP RL ER Sbjct: 72 KWSPAETKPYPDRLDER 88
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 8.052e-50 Identity = 88/193 (45.60%), Postives = 104/193 (53.89%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK-------------------------------------------VISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLT 616 RI ELP VDMFVTTAD LEPP++TVNTVLSLLA+DYP KLACYVSDD CSPL Y+L EA++FA+ WVPFC+++ V +RAPFRYF +DW MK + N+ D P L+Y+SREK P HHYKAGAMN LT Sbjct: 87 RIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGPADGKFLEDWTFMKSEYEKLVHRIEDADEPSLLRHGGGEFAEFLDVERGNHPTIIKVLWDNNRSRTGDGFPRLIYVSREKSPNLHHHYKAGAMNALT 279 HSP 2 Score: 51.9878 bits (123), Expect = 8.052e-50 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 723 +DCDM+ NNP +VL AMCL LG +E AF+Q+PQ F Sbjct: 294 LDCDMFVNNPRVVLHAMCLLLGFDDEISCAFVQTPQKF 331 HSP 3 Score: 25.7942 bits (55), Expect = 8.052e-50 Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 6 HCKWTPFTYKTYPQRLQER 62 + KW+P + T+P+ L ER Sbjct: 69 NAKWSPVRFDTFPENLAER 87
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.363e-49 Identity = 92/191 (48.17%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 173 RIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKN------------------------------------------MKVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVL 613 R+ +LP VDMFV TAD EPPI+ V+TVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN ++RAP RYF +DW+ +KV+ ENKGG+ D EIPH++YISREKRP + H+ K GAMN L Sbjct: 88 RVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYEFNRDWEKTKREYEKLRRKVEDATGDSHMLDVEDDFEAFSNTKPNDHSTLVKVVWENKGGVGDEKEIPHIIYISREKRPNYVHNQKCGAMNFL 278 HSP 2 Score: 40.0466 bits (92), Expect = 1.363e-49 Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYF 723 +DCDMYAN+ ++V QAMC+ L S N AF+Q Q F Sbjct: 294 VDCDMYANDADVVRQAMCILLQESLNMKHCAFVQFRQEF 332 HSP 3 Score: 24.6386 bits (52), Expect = 1.363e-49 Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P K +P RL ER Sbjct: 72 KWSPADTKPFPDRLDER 88
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 1.155e-31 Identity = 60/154 (38.96%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 293 KLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNM------------------------------------------KVI----SENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLT 616 +LACYVSDD CSP+ +Y+L EA+ FA+ WVPFC+++ V +RAPFRYF DW M KVI S+N+ G PHL+Y+SREK P H HHYKAGAMN LT Sbjct: 173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPADRKFLDDWTFMKSEYDKLVRRIEDADETTLLRQGGGEFAEFMDAKRTNHRAIVKVIWDNNSKNRIGEEGGFPHLIYVSREKSPGHHHHYKAGAMNALT 326 HSP 2 Score: 50.0618 bits (118), Expect = 1.155e-31 Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 1 Query: 610 IDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 723 +DCDM+AN+P++VL AMCL LG +E F+Q PQ F Sbjct: 341 VDCDMFANDPQVVLHAMCLLLGFDDEISSGFVQVPQSF 378
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 ELP VDM VTTAD LEPP++TVNTVLSLLA+DYP +LACYVSDD CSPL ++L EA+ FA WVPFC++Y V +RAPFRYF Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYF 218
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 ELP VDM VTTAD LEPP++TVNTVLSLLA+DYP +LACYVSDD CSPL ++L EA+ FA WVPFC++Y V +RAPFRYF Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYF 218 The following BLAST results are available for this feature:
BLAST of CX295096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295096 ID=CX295096; Name=CX295096; organism=Citrus clementina; type=EST; length=725bpback to top |