CX295103

Overview
NameCX295103
Unique NameCX295103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_SPIOL (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 449.899 bits (1156), Expect = 6.100e-126
Identity = 220/234 (94.02%), Postives = 229/234 (97.86%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            Q+EIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQ+NPKAKVSVKLV EAGIGTVASGVAKGNADIIQ+SGHDGGTGASPISSIKHAGGPWELGL+ETHQTLI+NGLRERVILRVDGG K GVDV+MAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRG+LAQLG+ KLDD
Sbjct:  957 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQINPKAKVSVKLVAEAGIGTVASGVAKGNADIIQVSGHDGGTGASPISSIKHAGGPWELGLSETHQTLISNGLRERVILRVDGGLKCGVDVMMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGILAQLGFEKLDD 1190          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB1_ARATH (Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2)

HSP 1 Score: 448.743 bits (1153), Expect = 1.359e-125
Identity = 221/234 (94.44%), Postives = 228/234 (97.44%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIK+AQGAKPGEGGQLPGKKVSAYIARLR+SKPGVPLISPPPHHDIYSIEDLAQLI+DLHQ+NP AKVSVKLV EAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGG KSGVDVLMAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVN+FLYVAEEVRG+LAQLGY  LDD
Sbjct: 1088 QLEIKVAQGAKPGEGGQLPGKKVSAYIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPNAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYNSLDD 1321          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_MAIZE (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 2.170e-123
Identity = 217/234 (92.74%), Postives = 226/234 (96.58%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            Q+EIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQ+NPKAKVSVKLV EAGIGTVASGV+K NADIIQISGHDGGTGASPISSIKHAGGPWELGLTET+QTLI NGLRERV+LRVDGGF+SG DVL+AA MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVN+FL+VAEEVR  LAQLGY KLDD
Sbjct: 1054 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQINPKAKVSVKLVSEAGIGTVASGVSKANADIIQISGHDGGTGASPISSIKHAGGPWELGLTETNQTLIQNGLRERVVLRVDGGFRSGQDVLIAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLFVAEEVRAALAQLGYEKLDD 1287          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB2_ARATH (Ferredoxin-dependent glutamate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 1.077e-122
Identity = 214/234 (91.45%), Postives = 226/234 (96.58%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIK+AQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLI+DLHQVNPKAKVSVKLV E GIGTVASGVAK NADIIQISG+DGGTGASPISSIKHAGGPWELGL ET +TLI NGLRERVI+RVDGGFKSGVDVL+AA MGADEYGFG++AMIATGC+MARICHTNNCPVGVASQREELRARFPG+PGDLVNFFLY+AEEVRG+LAQLGY KLDD
Sbjct: 1064 QLEIKVAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVSETGIGTVASGVAKANADIIQISGYDGGTGASPISSIKHAGGPWELGLAETQKTLIGNGLRERVIIRVDGGFKSGVDVLIAAAMGADEYGFGTLAMIATGCIMARICHTNNCPVGVASQREELRARFPGLPGDLVNFFLYIAEEVRGILAQLGYEKLDD 1297          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_ANTSP (Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.784e-108
Identity = 182/234 (77.78%), Postives = 213/234 (91.03%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIKIAQGAKPGEGGQLPGKKVS YIA LRN KPGV LISPPPHHDIYSIEDLAQLI+DLHQ+NP A+VSVKLV   GIGT+A+GVAKGNADIIQISGHDGGTGASP+SSIKHAG PW++GL E H TL+ N LRE+VILRVDGG ++G D+++AA+MGA+E+GFG+VAMIATGCVMAR+CHTNNCPVGVA+QR++LR RFPG+P D+VNFF++VAEEVR +LA+LGY  L++
Sbjct:  983 QLEIKIAQGAKPGEGGQLPGKKVSPYIAELRNCKPGVTLISPPPHHDIYSIEDLAQLIFDLHQINPDAQVSVKLVASLGIGTIAAGVAKGNADIIQISGHDGGTGASPLSSIKHAGAPWDVGLAEVHTTLVENSLREKVILRVDGGLRTGKDIIIAALMGAEEFGFGTVAMIATGCVMARVCHTNNCPVGVATQRQDLRNRFPGIPSDVVNFFIFVAEEVREILAELGYKSLEE 1216          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_PORYE (Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis GN=gltB PE=3 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.278e-107
Identity = 185/234 (79.06%), Postives = 209/234 (89.32%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIKIAQGAKPGEGGQLPGKK+S YIA LR  KPGVPLISPPPHHDIYSIEDL+QLI+DLHQ+NPKAK+SVKLV E GIGT+A+GVAKGNADIIQISGHDGGTGASP+SSIKHAG PWELGL+E HQ L  N LR+RV LRVDGG ++G D+++AA+MGA+E+GFG+VAMIATGC+MARICHTN CPVGVA+QREELRARF GVP  LVNFFL++  EVR +LA LGY  LDD
Sbjct:  987 QLEIKIAQGAKPGEGGQLPGKKISPYIATLRKCKPGVPLISPPPHHDIYSIEDLSQLIFDLHQINPKAKISVKLVSEIGIGTIAAGVAKGNADIIQISGHDGGTGASPLSSIKHAGSPWELGLSEVHQLLAENQLRDRVTLRVDGGLRTGSDIVLAAIMGAEEFGFGTVAMIATGCIMARICHTNKCPVGVATQREELRARFSGVPEALVNFFLFIGNEVREILASLGYKSLDD 1220          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTS_SYNY3 (Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gltS PE=1 SV=2)

HSP 1 Score: 387.882 bits (995), Expect = 2.847e-107
Identity = 184/234 (78.63%), Postives = 209/234 (89.32%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIK+AQGAKPGEGGQLPGKKVS YIA LR SKPGV LISPPPHHDIYSIEDLAQLIYDLHQ+NP+A+VSVKLV E GIGT+A+GVAK NADIIQISGHDGGTGASP+SSIKHAG PWELG+TE H+ L+ N LR+RV+LR DGG K+G DV+MAA+MGA+EYGFGS+AMIA GC+MAR+CHTNNCPVGVA+Q+E LR RF GVPG +VNFF ++AEEVR +LA LGY  LDD
Sbjct:  998 QLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDD 1231          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_PORPU (Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea GN=gltB PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.410e-106
Identity = 182/234 (77.78%), Postives = 208/234 (88.89%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            QLEIKIAQGAKPGEGGQLPGKK+S YIA LR  KPGVPLISPPPHHDIYSIEDL+QLI+DLHQ+NP AK+SVKLV E GIGT+A+GVAKGNADIIQISGHDGGTGASP+SSIKHAG PWELGL+E HQ L  N LR+RV LRVDGG ++G D+++AA+MGA+E+GFG++AMIATGC+MARICHTN CPVGVA+QREELRARF GVP  LVNFFL++  EVR +LA LGY  LD+
Sbjct:  987 QLEIKIAQGAKPGEGGQLPGKKISPYIATLRKCKPGVPLISPPPHHDIYSIEDLSQLIFDLHQINPTAKISVKLVSEIGIGTIAAGVAKGNADIIQISGHDGGTGASPLSSIKHAGSPWELGLSEVHQLLAENQLRDRVTLRVDGGLRTGSDIVLAAIMGAEEFGFGTIAMIATGCIMARICHTNKCPVGVATQREELRARFSGVPEALVNFFLFIGNEVREILASLGYKSLDE 1220          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_CYACA (Ferredoxin-dependent glutamate synthase OS=Cyanidium caldarium GN=gltB PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.513e-100
Identity = 173/232 (74.57%), Postives = 206/232 (88.79%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKL 696
            QLEIKI+QGAKPGEGGQLPGKKVS YIA LR  KPGV LISPPPHHDIYSIEDLAQLI+DLHQVNP+ KVSVKLV E G+GT+A GVAK  A+IIQISGHDGGTGASP+SSIKHAG PWELGL E H  L+ N LRE+VILRVDGG ++G DV+MAA++GADEYGFG++AMIA GC+MAR+CHTN+CPVGVA+Q+EELR R+PGVP ++VN+F+++AEE+R +L++LG+  L
Sbjct:  994 QLEIKISQGAKPGEGGQLPGKKVSPYIATLRACKPGVTLISPPPHHDIYSIEDLAQLIFDLHQVNPECKVSVKLVSEIGVGTIAVGVAKAGAEIIQISGHDGGTGASPLSSIKHAGVPWELGLHEVHCLLVENNLREKVILRVDGGLRTGQDVVMAALLGADEYGFGTIAMIAGGCIMARVCHTNSCPVGVATQKEELRMRYPGVPENVVNYFIFLAEEIRVILSKLGFETL 1225          
BLAST of CX295103 vs. ExPASy Swiss-Prot
Match: GLTB_AZOBR (Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense GN=gltB PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.375e-85
Identity = 153/234 (65.38%), Postives = 189/234 (80.77%), Query Frame = 1
Query:    1 QLEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQVNPKAKVSVKLVGEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDGGFKSGVDVLMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLGYAKLDD 702
            +LEIK+AQGAKPGEGGQLPG KV+  IARLR+S PGV LISPPPHHDIYSIEDLAQLIYDL Q+NP AKV+VKLV  +GIGT+A+GVAK NADII ISG+ GGTGASP +SIK AG PWE+GL+E HQ L  N LR RV LR DGG K+G D+++AA++GA+E+G G+ ++IA GC+M R CH+N CPVGV  Q ++LR +F G P  +VN F ++AEEVR +LA LG+  L++
Sbjct:  963 ELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNE 1196          
The following BLAST results are available for this feature:
BLAST of CX295103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GLTB_SPIOL6.100e-12694.02Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB1_ARATH1.359e-12594.44Ferredoxin-dependent glutamate synthase 1, chlorop... [more]
GLTB_MAIZE2.170e-12392.74Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB2_ARATH1.077e-12291.45Ferredoxin-dependent glutamate synthase 2, chlorop... [more]
GLTB_ANTSP9.784e-10877.78Ferredoxin-dependent glutamate synthase OS=Antitha... [more]
GLTB_PORYE1.278e-10779.06Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTS_SYNY32.847e-10778.63Ferredoxin-dependent glutamate synthase 2 OS=Synec... [more]
GLTB_PORPU2.410e-10677.78Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTB_CYACA1.513e-10074.57Ferredoxin-dependent glutamate synthase OS=Cyanidi... [more]
GLTB_AZOBR1.375e-8565.38Glutamate synthase [NADPH] large chain OS=Azospiri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05068F04SK DroRLeaf1 Citrus clementina cDNA clone C05068F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295103 ID=CX295103; Name=CX295103; organism=Citrus clementina; type=EST; length=704bp
CAGCTGGAAATCAAAATTGCACAAGGTGCAAAGCCAGGGGAAGGAGGCCA
GTTGCCTGGGAAAAAAGTTAGTGCATACATTGCAAGGTTGAGAAATTCTA
AACCTGGTGTTCCACTTATATCTCCACCTCCGCATCACGACATTTATTCG
ATTGAGGATCTTGCCCAGTTGATCTATGACCTTCATCAGGTTAACCCTAA
AGCTAAGGTGTCTGTAAAGCTTGTGGGAGAAGCTGGAATAGGAACAGTTG
CTTCTGGGGTTGCAAAGGGTAATGCTGATATTATACAGATATCTGGGCAT
GACGGTGGAACTGGAGCCAGCCCTATTAGTTCAATAAAGCATGCTGGTGG
TCCTTGGGAACTTGGACTTACAGAAACGCATCAAACTCTCATTGCAAATG
GACTGAGAGAAAGAGTAATTCTCAGAGTTGATGGCGGCTTCAAAAGCGGA
GTTGATGTCTTAATGGCTGCAGTAATGGGTGCTGATGAATATGGATTTGG
TTCTGTGGCAATGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCATA
CAAACAATTGCCCAGTTGGGGTTGCCAGTCAAAGAGAAGAACTGCGTGCA
CGATTTCCTGGTGTGCCTGGTGATCTTGTTAATTTTTTCCTTTATGTAGC
TGAGGAGGTTAGAGGCATGTTGGCACAACTGGGTTATGCGAAGTTGGATG
ATGT
back to top