CX295109

Overview
NameCX295109
Unique NameCX295109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2654 contig Ccv1_Contig2654:86..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 64/101 (63.37%), Postives = 85/101 (84.16%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +LG   SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+
Sbjct:   10 LLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKI 108          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEKVQ 348
            +LG W SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+KV+
Sbjct:    9 LLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVR 113          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 63/101 (62.38%), Postives = 80/101 (79.21%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +L  WPS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K+
Sbjct:    8 LLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKL 108          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 63/101 (62.38%), Postives = 80/101 (79.21%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +L  WPS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K+
Sbjct:    8 LLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKL 108          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 66/100 (66.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 342
            +LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K
Sbjct:    6 LLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDK 103          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+KV
Sbjct:    6 LLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 62/101 (61.39%), Postives = 81/101 (80.20%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+KV
Sbjct:    6 LLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +L  WPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K+
Sbjct:    8 LLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKI 107          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 61/101 (60.40%), Postives = 81/101 (80.20%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +LG W SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +KV
Sbjct:    6 LLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKV 104          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.769e-30
Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            +L  W S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K+
Sbjct:    7 LLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKI 106          
The following BLAST results are available for this feature:
BLAST of CX295109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN1.201e-3363.37Probable glutathione S-transferase OS=Glycine max ... [more]
GSTU6_ORYSJ1.569e-3360.00Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTXC_TOBAC2.676e-3362.38Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC2.676e-3362.38Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU1.124e-3166.00Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_TOBAC1.918e-3163.37Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC5.579e-3161.39Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC7.287e-3161.39Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_TOBAC7.287e-3160.40Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_SOYBN2.769e-3059.41Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]

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Properties
Property NameValue
Genbank descriptionC05068F10SK DroRLeaf1 Citrus clementina cDNA clone C05068F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295109 ID=CX295109; Name=CX295109; organism=Citrus clementina; type=EST; length=696bp
TAGAGAAAAAAAAAAAAGAAAATGGCAAAAAGCGACGTGAAGGTTTTGGG
TGCGTGGCCAAGCCCATTTGTGATGAGGGCAAGAATCGCACTTAAGATCA
AGTCTGTGGAGTATGAGTTTCTGGAGGAGAATTTGGGATCCAAAAGCGAG
CTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCAGTTCTGATTCA
CAATGATAAGCCTGTTTGCGAATCTCTCATCATTGTCGAGTACGTGGATG
AGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGAC
CGTGCCGTTGCTCGTTTCTGGGCCGCTTATGTTGATGAGAAGGTACAGTT
TCCTTTCTTTGTTTTGAAAAAAATGTTTTAAGTCAATTCTTTTTATTCGA
ATTATGTGCATCTAAAAATTTTTAATCTTTTTCAGTTTTGAAAACTGTTT
TCGGAAATTAATAAAGTCTCTCTTGGTAAATCAAGGAGGTAAAGTGCGTG
ATTGGAATTATTTCCGGTGGAAAAATGAACTTGAAAAGAAAACTAAAGAA
AGATTAAGAAAGCAGAGCCCAAGAGGAAAACAATCAATAGAATCTGGAAG
TTTGATTTTTCATAAAACGGGCTTTCTAGAGACCCCCAATAACCAATTCT
CTCATCAATTGCTAAGCAGTACTTTCAAGTCTCTCAACTCCCGAGC
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