CX295116

Overview
NameCX295116
Unique NameCX295116
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295116 vs. ExPASy Swiss-Prot
Match: GRIP_ARATH (Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 2.227e-75
Identity = 149/237 (62.87%), Postives = 188/237 (79.32%), Query Frame = 2 
Query:    2 ESLEAPLADAVSDRSKATETISSLQVLVAEKETKIAEMEAASTGKEARFKAAVETVKGELAHLKREHEKEKESWEAASQAFRKKLEIAESNCMHAEIEAAKLRSQLESELSVQNQLLSTRDAELMAAKQEIIHLEREFSSYKIRAHALLQKKDAELAAANDTEQLRXXXXXXXXXXXXMSLVSAEKDKALQELQEALANHDKELAERDAALNNANQQIKSIEIKLDSMNTKHQMEKE 712
            E LEA + DA+S+R KA ETISSLQVL+AEKE+KIAEMEAA+TG+ AR +AA ET+KGELAHLK E+EKEKE+WEA+  A + KLEIAESN + AEIE AK+RSQL SE+S+Q Q+LST+DAEL  A++EI  L+ EFSSYKIRAHALLQKKD ELAAA D+EQ++            + LVSAE+D+A Q+LQ ALA+ +KEL ER  AL +A++QIKS+E+KLDS   ++Q EK+
Sbjct:  294 EGLEAQVVDALSERDKAAETISSLQVLLAEKESKIAEMEAAATGEAARLRAAAETLKGELAHLKSENEKEKETWEASCDALKSKLEIAESNYLQAEIEVAKMRSQLGSEMSMQTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEALKEAEKEVYLVSAERDRAQQDLQSALASLEKELEERAGALKDASEQIKSLEVKLDSTVARNQAEKQ 530
The following BLAST results are available for this feature:
BLAST of CX295116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GRIP_ARATH2.227e-7562.87Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC05068G05SK DroRLeaf1 Citrus clementina cDNA clone C05068G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295116 ID=CX295116; Name=CX295116; organism=Citrus clementina; type=EST; length=712bp
AGAGAGTTTGGAAGCTCCATTGGCTGATGCTGTATCTGATAGAAGCAAAG
CAACCGAAACTATTTCTTCTCTTCAGGTGCTAGTTGCAGAGAAAGAGACT
AAAATTGCTGAGATGGAAGCAGCCTCGACTGGTAAAGAAGCACGGTTTAA
AGCTGCTGTGGAGACTGTTAAAGGAGAGCTTGCCCATCTGAAACGTGAGC
ATGAGAAGGAAAAGGAGAGCTGGGAAGCTGCCTCCCAGGCATTCAGAAAA
AAGCTGGAAATTGCTGAGAGTAACTGCATGCATGCTGAAATTGAAGCAGC
TAAGCTGAGAAGTCAGCTGGAATCAGAATTATCTGTGCAAAACCAGTTGC
TAAGTACTAGAGATGCTGAACTTATGGCTGCCAAACAAGAGATTATCCAC
CTTGAACGTGAATTTTCTTCTTACAAGATTCGTGCTCATGCACTTCTCCA
GAAAAAGGATGCAGAGCTAGCTGCAGCTAACGACACTGAACAGCTCAGAG
CTCTTGAGGAAGCATTGAAAGAAACTGAAAAAGAAATGTCCCTGGTTTCT
GCAGAAAAAGATAAGGCCCTTCAAGAACTTCAAGAGGCTTTGGCTAATCA
TGACAAAGAACTTGCAGAAAGAGATGCAGCTCTGAACAATGCAAACCAGC
AGATAAAGAGCATAGAGATCAAGCTTGATTCTATGAATACTAAACACCAA
ATGGAGAAAGAA
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