CX295120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.364e-37 Identity = 66/127 (51.97%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 19 HYSSMEGVLYCKPHFEQLFKESGNFNKNFQ-SPAKSAEKLTPELTRSPSKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHL 396 +++S +GV+YC+ HF+QLFK +G+ K+F +P E+ + T+S ++ +S F GT++KC +C+K VYP+E+V V+ AYH+ CFKC HGGC+ISPSNY A EG LYCKHH QLFK+KG+Y+ L Sbjct: 49 NFNSFDGVVYCRHHFDQLFKRTGSLEKSFDGTPKFKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQL 175 HSP 2 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 178 FSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGS 384 F+GT +KC C KTVY ++K+ + YHK CF+C H ++ SN+ + +G++YC+HHF QLFK GS Sbjct: 4 FTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGS 72
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: XIRP2_MOUSE (Xin actin-binding repeat-containing protein 2 OS=Mus musculus GN=Xirp2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 88 NFNKNFQSPAKSAEKLTPELTRSPSKA-----------ASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 N +NFQ + +E++ + S A S F +E C C KTVYP+E + + Q +HK+CF+C H +S NYA+L G +YCK HF QLFK KG+Y+ Sbjct: 3209 NLRRNFQKTWQESERVFQRVGYETSDAHATEMSRAFQEESAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYD 3320
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMA1_MOUSE (LIM domain and actin-binding protein 1 OS=Mus musculus GN=Lima1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 154 SPSKAASMFSG-TQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 SPSK A F +E C C KTVYP+E++ Q +H +CF+CS+ +S YA+L G +YCK HF+QLFK KG+Y+ Sbjct: 372 SPSKTAKKFQAPAKESCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYD 451
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMD2_RAT (LIM domain-containing protein 2 OS=Rattus norvegicus GN=Limd2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 109 SPAKSAEKLTPELTRSPSKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 +P+ A+ + T SK+ S+ + +E CA+C KTVYP+E++ + +H +CF C H +S +YAA+ G YCK HF QLFK KG+Y+ Sbjct: 11 TPSHEAKGSSGNSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCKPHFQQLFKSKGNYD 104
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMD2_BOVIN (LIM domain-containing protein 2 OS=Bos taurus GN=LIMD2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 109 SPAKSAEKLTPELTRSPSKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 +P+ A+ T SK+ S+ + +E CA+C KTVYP+E++ + +H +CF C H +S +YAAL G YCK HF QLFK KG+Y+ Sbjct: 11 TPSHEAKGGGSSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYD 104
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMA1_HUMAN (LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 109 SPAKSAEKLTPELTRSPSKAASMFSG-TQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 SP A L+ SP KA F +E C C KTVYP+E++ Q +H +CF+CS+ +S YA+L G +YCK HF+QLFK KG+Y+ Sbjct: 362 SPDSRASSLSES---SPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYD 453
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMD2_MOUSE (LIM domain-containing protein 2 OS=Mus musculus GN=Limd2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 109 SPAKSAEKLTPELTRSPSKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 +P+ A+ + T SK+ S+ + +E CA+C KTVYP+E++ + +H +CF C H +S +YAA+ G YC+ HF QLFK KG+Y+ Sbjct: 11 TPSHEAKGSSGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSKGNYD 104
BLAST of CX295120 vs. ExPASy Swiss-Prot
Match: LIMD2_HUMAN (LIM domain-containing protein 2 OS=Homo sapiens GN=LIMD2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 160 SKAASMFSGTQEKCASCSKTVYPLEKVAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYN 390 SK+ S+ + +E CA+C KTVYP+E++ + +H +CF C H +S +YAAL G YCK HF QLFK KG+Y+ Sbjct: 27 SKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYD 103 The following BLAST results are available for this feature:
BLAST of CX295120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295120 ID=CX295120; Name=CX295120; organism=Citrus clementina; type=EST; length=675bpback to top |