CX295129

Overview
NameCX295129
Unique NameCX295129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10414 contig Ccv1_Contig10414:65..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.123e-92
Identity = 162/222 (72.97%), Postives = 185/222 (83.33%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEWG + YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C   LENYCPK I+TY +KY+DG+ TYGGYSD MVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKPGM               KFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQAA+GTMDGIIDTVSA HPL+PLIGLL S GKLV++GA
Sbjct:   56 KNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGA 277          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.046e-91
Identity = 155/221 (70.14%), Postives = 183/221 (82.81%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +NEWGNA+YP +PGHEIVGVVTEVG+KV  FKVGDKVGVGCMVGSCRSC+SC   LENYCPK+I+TY S Y+DGT+TYGGYSD MV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKPG+               KF KA G KVTVISTSP+KK EAV RLGADSF+VSR+ ++MQ+AMGT+DGIIDTVSA HPL+PL+GLLKSQGK++++G
Sbjct:   59 KNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVG 279          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.470e-84
Identity = 149/222 (67.12%), Postives = 176/222 (79.28%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEWG + YP+VPGHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGM               KFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +++ AMGTMDGIIDTVSA H L+PL+GLLK +GKLV++GA
Sbjct:   54 KNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGA 275          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.347e-82
Identity = 148/225 (65.78%), Postives = 175/225 (77.78%), Query Frame = 2
Query:   17 SLDQNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            S+ +NEWG   YP+VPGHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+I+T  +K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGM               KFAKAMG KVTVISTS  K+ EAV RLGAD+FLVSRD  +M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKLV++GA
Sbjct:   51 SMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGA 275          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.594e-81
Identity = 145/221 (65.61%), Postives = 170/221 (76.92%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +NEWG   YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K I+TY + Y DGTI  GGYSD MVADEHF++R PE  PLDA APLLCAGIT YSPL+++GLDKPG+               KFAKA G KVTVISTS SKK EA++ LG D F+VS D  +MQAA+GT+DGIIDTVSA HP++PL+ LLK  GKL+++G
Sbjct:   58 KNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVG 278          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.869e-80
Identity = 147/222 (66.22%), Postives = 170/222 (76.58%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEWG   YPIVPGHEIVG VTEVGSKV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA    DG+ITYGGY+D+MVAD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG                K AKA G  VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++PL+GLLK  GKLV++GA
Sbjct:   35 KNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGA 256          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.282e-76
Identity = 137/221 (61.99%), Postives = 164/221 (74.21%), Query Frame = 2
Query:   29 NEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            N WG   YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC  + E++C   I TY S Y DGT+T+GGYSDTMVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGLDKPG                K AKA G +VTVI  S SK+ EA+E+LGADSFL++ DQ++M+ A  ++DGIIDTV   HPL PL  LLK  GKLV++GA
Sbjct:   59 NNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGA 279          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 2.778e-75
Identity = 138/221 (62.44%), Postives = 163/221 (73.76%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +NEW NA YP+VPGHEI GVVTE G  V+KFK GDKVGVGCMV SC SCDSC   LEN+CP VI TY S   DGT+TYGGYS  +V  E FVVR PE  PLD  APLLCAGITVYSP++++GL+ P                 KFAKA G+ VTVIS+SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+TVSA  P+ PL+GLLK  GK++L+G
Sbjct:   51 KNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVG 271          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.629e-75
Identity = 133/222 (59.91%), Postives = 167/222 (75.23%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC  D ENYC K I TY   +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P                 +FAKA G KVTV+S++  K  +A++ LGAD FLVS D+D+M+AAMGTMDGIIDTVSA H + PLIGLLKS GKLVLLGA
Sbjct:   59 KNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGA 280          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.190e-75
Identity = 141/224 (62.95%), Postives = 171/224 (76.34%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTS-PSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +N++GN+IYP VPGHE++G+V EVGSKV K+KVGDKVGVG  V SCRSC +C  +LENYCPK I+T   K+ DGT TYGGYSD+MV DEHFV RIPEG PLD   +  LC G + +SPL++YGLDKPG+               KFAK  G+K+TVISTS P+KK EA++ LGADSFLVSRD D+M+A   T+DGIIDTVSA H ++PLIGLLKS GKLVL+GA
Sbjct:   59 KNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGA 281          
The following BLAST results are available for this feature:
BLAST of CX295129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
MTDH_FRAAN1.123e-9272.97Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR8.046e-9170.14Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH8_ARATH1.470e-8467.12Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH7_ARATH2.347e-8265.78Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
GEDH1_OCIBA2.594e-8165.61Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_PETCR2.869e-8066.22Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_APIGR3.282e-7661.99Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH5_ORYSJ2.778e-7562.44Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH6_ARATH3.629e-7559.91Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH3_STYHU6.190e-7562.95Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionC05068H06SK DroRLeaf1 Citrus clementina cDNA clone C05068H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295129 ID=CX295129; Name=CX295129; organism=Citrus clementina; type=EST; length=693bp
AGGGCCATTCAGATCTTCACTTGATCAAAATGAATGGGGCAATGCCATTT
ACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGA
AGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCAT
GGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACT
ACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACC
ATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGT
GGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCT
GTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAG
CCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGC
TGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCT
CCCCTAGCAAGAAGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTT
TTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGA
TGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAATGCCGTTGATTG
GACTGTTGAAATCTCAAGGAAAGCTTGTACTTCTTGGTGCACC
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