CX295131

Overview
NameCX295131
Unique NameCX295131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD_ARATH (AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1 SV=2)

HSP 1 Score: 390.963 bits (1003), Expect = 3.487e-108
Identity = 186/236 (78.81%), Postives = 201/236 (85.17%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            +YSEN +W IQLPRLYN+YK MGIV SFQNI+DN+FIPLFE T+DP SHPQLHVFL  VVGFDLVDDESKPERRPTKHMP PA+WTN FNP                 KLRESKGM TI LRPH GEAG+IDHLAA FL C++I+HGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFP+FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIAR
Sbjct:  536 LYSENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIAR 771          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD_ORYSJ (Probable AMP deaminase OS=Oryza sativa subsp. japonica GN=AMPD PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.122e-106
Identity = 179/236 (75.85%), Postives = 202/236 (85.59%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            +YSEN +W IQ+PR+YNVY++MG + SFQN++DN+F+PLFEVT+DP+SHPQLHVFL  VVG DLVDDESKPERRPTKHMP P +WTN FNP                 KLRESKGM TIKLRPHCGEAG+IDHLAAAFL  +NI+HG+NL+KSPVLQYLYYLAQIGLAMSPLSNNSLF+DYHRNPFP FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA +WKLSSCDLCEIAR
Sbjct:  512 LYSENVVWLIQIPRIYNVYREMGTINSFQNLLDNIFLPLFEVTVDPASHPQLHVFLQQVVGLDLVDDESKPERRPTKHMPTPEQWTNVFNPAYAYYVYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDIDHLAAAFLTSHNIAHGVNLKKSPVLQYLYYLAQIGLAMSPLSNNSLFIDYHRNPFPTFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASLWKLSSCDLCEIAR 747          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD_DICDI (AMP deaminase OS=Dictyostelium discoideum GN=amdA PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.018e-80
Identity = 142/236 (60.17%), Postives = 176/236 (74.58%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            ++S    W IQ+PRLY+VY++     +FQ+ ++NVF PLFEVT DPSSHP+LH+FL  VVG D VDDESK E++ T+  P P EW++E NP                 + RE KG+  + LRPH GEAGE+DH+ AAF L + I+HGINLRK+PVLQYLYYL QIG+AMSPLSNNSLFL Y+RNPFP FF RGLNVS+S+DDPLQ H TKE L+EEYS+A +VW+LS CD+CEIAR
Sbjct:  366 LFSTKVRWLIQVPRLYDVYRETSTT-TFQDFLNNVFHPLFEVTKDPSSHPKLHLFLQQVVGIDCVDDESKFEKKFTEKFPVPGEWSSEHNPPYTYYLYYLYANLYTLNQFREEKGLNILTLRPHSGEAGEVDHMGAAFYLAHGINHGINLRKTPVLQYLYYLTQIGIAMSPLSNNSLFLTYNRNPFPAFFARGLNVSISTDDPLQFHYTKEPLMEEYSIATQVWRLSVCDICEIAR 600          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD2_RAT (AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.437e-77
Identity = 137/237 (57.81%), Postives = 168/237 (70.89%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTK-HMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            ++S N  W +Q+PRL++VY+  G + +FQ +++N+F+PLFE T+ P+SHP+LH+FL  V GFD VDDESKPE        P P  W  E NP                  LR  +G  T  LRPHCGEAG I HL +AF+L  NISHG+ LRK+PVLQYLYYLAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+AR
Sbjct:  509 VHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELAR 745          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD2_MOUSE (AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.437e-77
Identity = 137/237 (57.81%), Postives = 168/237 (70.89%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTK-HMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            ++S N  W +Q+PRL++VY+  G + +FQ +++N+F+PLFE T+ P+SHP+LH+FL  V GFD VDDESKPE        P P  W  E NP                  LR  +G  T  LRPHCGEAG I HL +AF+L  NISHG+ LRK+PVLQYLYYLAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+AR
Sbjct:  483 VHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELAR 719          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD2_HUMAN (AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.437e-77
Identity = 137/237 (57.81%), Postives = 168/237 (70.89%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTK-HMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            ++S N  W +Q+PRL++VY+  G + +FQ +++N+F+PLFE T+ P+SHP+LH+FL  V GFD VDDESKPE        P P  W  E NP                  LR  +G  T  LRPHCGEAG I HL +AF+L  NISHG+ LRK+PVLQYLYYLAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+AR
Sbjct:  563 VHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELAR 799          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD_YEAST (AMP deaminase OS=Saccharomyces cerevisiae GN=AMD1 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 5.082e-75
Identity = 134/236 (56.78%), Postives = 173/236 (73.31%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            + S N  W +Q+PRLY++YK+ GIV+SFQ+I  N+F PLFEVT +P SHP+LHVFL  V+GFD VDDESK +RR  +  PKP+ W    NP                 + R  +G  T+ LRPHCGEAG+ +HL +A+LL + ISHGI LRK P +QYLYYL Q+G+AMSPLSNN+LFL Y +NPFP +F+RGLNVSLS+DDPLQ   T+E L+EEYSVAA+++KLS+ D+CE+AR
Sbjct:  507 VISHNVRWLVQIPRLYDIYKKTGIVQSFQDICKNLFQPLFEVTKNPQSHPKLHVFLQRVIGFDSVDDESKVDRRFHRKYPKPSLWEAPQNPPYSYYLYYLYSNVASLNQWRAKRGFNTLVLRPHCGEAGDPEHLVSAYLLAHGISHGILLRKVPFVQYLYYLDQVGIAMSPLSNNALFLTYDKNPFPRYFKRGLNVSLSTDDPLQFSYTREPLIEEYSVAAQIYKLSNVDMCELAR 742          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD_SCHPO (AMP deaminase OS=Schizosaccharomyces pombe GN=ada1 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.669e-75
Identity = 135/236 (57.20%), Postives = 171/236 (72.46%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            ++S N  W IQ+PRLY+VYK+ GIV++F+ ++ NVF PLFEVT DP +HP+LHVFL  V+GFD VDDESKPERR  +  P P  W    NP                   R+ +G  T  LRPHCGEAG+ DHLA+AFLL + I+HGI LRK P LQYL+YL QI +AMSPLSNN+LFL Y +NPF  +F+RGLNVSLS+DDPLQ   T+E L+EEY+VAA+++KLS+ D+CE+AR
Sbjct:  479 LFSPNVRWLIQVPRLYDVYKKSGIVETFEEVVRNVFEPLFEVTKDPRTHPKLHVFLQRVIGFDSVDDESKPERRTFRKFPYPKHWDINLNPPYSYWLYYMYANMTSLNSWRKIRGFNTFVLRPHCGEAGDTDHLASAFLLSHGINHGILLRKVPFLQYLWYLDQIPIAMSPLSNNALFLAYDKNPFLTYFKRGLNVSLSTDDPLQFAFTREPLIEEYAVAAQIYKLSAVDMCELAR 714          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD3_RAT (AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.808e-72
Identity = 129/237 (54.43%), Postives = 168/237 (70.89%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESK-PERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            +YS N  W IQ+PR+Y++++   ++ SF  +++N+F+PLF+ TI+P  H +LH+FL  V GFD VDDESK  +   +   P P  WT+E NP                  LR  +G+ T   RPHCGEAG I HL +AFL  +NISHG+ L+KSPVLQYLYYLAQI +AMSPLSNNSLFL+Y +NP   F  +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIAR
Sbjct:  460 VYSPNMRWIIQVPRIYDIFRSKKLLPSFGKMLENIFLPLFQATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDKSPSPDLWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEAGSITHLVSAFLTADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIAR 696          
BLAST of CX295131 vs. ExPASy Swiss-Prot
Match: AMPD3_HUMAN (AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.027e-72
Identity = 128/237 (54.01%), Postives = 168/237 (70.89%), Query Frame = 3
Query:    3 IYSENAIWFIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESK-PERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIAR 710
            +YS N  W IQ+PR+Y++++   ++ +F  +++N+F+PLF+ TI+P  H +LH+FL  V GFD VDDESK  +   +   P P  WT+E NP                  LR  +G+ T   RPHCGEAG I HL +AFL  +NISHG+ L+KSPVLQYLYYLAQI +AMSPLSNNSLFL+Y +NP   F  +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIAR
Sbjct:  462 VYSPNMRWIIQVPRIYDIFRSKKLLPNFGKMLENIFLPLFKATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDKSPNPDVWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEAGSITHLVSAFLTADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIAR 698          
The following BLAST results are available for this feature:
BLAST of CX295131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AMPD_ARATH3.487e-10878.81AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1... [more]
AMPD_ORYSJ1.122e-10675.85Probable AMP deaminase OS=Oryza sativa subsp. japo... [more]
AMPD_DICDI4.018e-8060.17AMP deaminase OS=Dictyostelium discoideum GN=amdA ... [more]
AMPD2_RAT2.437e-7757.81AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2... [more]
AMPD2_MOUSE2.437e-7757.81AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1[more]
AMPD2_HUMAN2.437e-7757.81AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2[more]
AMPD_YEAST5.082e-7556.78AMP deaminase OS=Saccharomyces cerevisiae GN=AMD1 ... [more]
AMPD_SCHPO8.669e-7557.20AMP deaminase OS=Schizosaccharomyces pombe GN=ada1... [more]
AMPD3_RAT1.808e-7254.43AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2... [more]
AMPD3_HUMAN4.027e-7254.01AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05068H08SK DroRLeaf1 Citrus clementina cDNA clone C05068H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295131 ID=CX295131; Name=CX295131; organism=Citrus clementina; type=EST; length=724bp
AAATTTACAGTGAGAATGCTATTTGGTTCATCCAGCTACCACGACTATAC
AATGTATACAAGCAAATGGGCATTGTTAAATCTTTTCAAAATATTATTGA
TAATGTGTTCATTCCCCTATTTGAAGTCACGATTGATCCAAGCTCCCATC
CTCAACTTCATGTGTTCCTGTTGATGGTTGTGGGTTTTGACCTTGTAGAT
GATGAAAGTAAACCAGAAAGACGTCCAACAAAGCACATGCCCAAACCGGC
TGAATGGACCAATGAGTTCAATCCGGCTTACTCGTATTATACTTATTACT
TCTATGCAAACTTGTATACTCTCAACAAGCTTCGTGAATCAAAGGGAATG
CCAACAATTAAACTGCGGCCTCATTGTGGGGAGGCTGGTGAAATTGACCA
TTTGGCTGCTGCATTCCTTTTATGTAATAACATATCACATGGTATTAATT
TGCGGAAGTCCCCAGTTTTGCAGTACTTGTATTACCTCGCTCAGATTGGA
TTGGCAATGTCACCACTGAGCAATAATTCTCTTTTCCTGGATTATCATCG
AAATCCGTTTCCTATGTTCTTCCAGCGCGGCCTGAATGTTTCACTCTCGT
CTGATGATCCTTTGCAAATCCACTTAACAAAAGAAGCACTTGTGGAAGAG
TATAGTGTTGCGGCAAAGGTGTGGAAGCTCAGTTCTTGTGACCTATGTGA
GATAGCAAGAATTCTGTTTATCAA
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