CX295135

Overview
NameCX295135
Unique NameCX295135
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.414e-74
Identity = 147/223 (65.92%), Postives = 160/223 (71.75%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMXXXXXXXXXXXXXAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIE 670
            LGGLLFGYDIGATSGAT+SLQSP LSGTTWFN S VQLGLVVSGSLYGALLGSI VY +ADFLGR+RELII                                  AMHGAPLYIAETCPSQIRGTLISLKELFIVLGIL G+ VGSFQI+ VGGWRYMYG   P+ALLMG+GM             AVQGKG LQEYKE+A+ AL KLR RPPGDK+SE+ ++
Sbjct:  107 LGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRWLLLRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVD 329          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.551e-52
Identity = 109/224 (48.66%), Postives = 138/224 (61.61%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMXXXXXXXXXXXXXAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEI 673
            LGGLL+GY+IGATS ATISLQSP LSG +W+NLS+V +GLV SGSLYGAL GSI+ ++IAD +GR++ELI+                                  AMH AP+YIAET PS IRG L+SLKE FIVLG++ GY +GS  +N   GWRYMY  S PLA++MGIGM              +QGKG+++  +E AI +L  LR     D  +E+  EI
Sbjct:   56 LGGLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIVAFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIYGVSVGLAMHAAPMYIAETAPSPIRGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSGWRYMYATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEI 279          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.353e-45
Identity = 96/224 (42.86%), Postives = 132/224 (58.93%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMXXXXXXXXXXXXXAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEI 673
            LG LLFGY+IGATS A +SL+SP LSG +W++LS+V +G++ SGSLYGAL+GSI+ +S+AD +GR++ELI+                                   MH AP+YIAET PSQIRG +ISLKE   VLG++ GY +GS  I  + GWRYMY    P  ++MG GM             A+QG+G+ +  ++ AI +L +LR     D  +E+  EI
Sbjct:   56 LGALLFGYEIGATSCAIMSLKSPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEFSTVLGMVGGYGIGSLWITVISGWRYMYATILPFPVIMGTGMCWLPASPRWLLLRALQGQGNGENLQQAAIRSLCRLRGSVIADSAAEQVNEI 279          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 56/173 (32.37%), Postives = 76/173 (43.93%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            + GLL GY++G  SGA + ++       T   LS  +  +VVS  L GALL S+    + D  GR+  +I+                                  +     +YIAE  P   RG L+SL EL IV+GILS Y       N   GW+YM+GL  PL +L  I M
Sbjct:   53 VSGLLVGYELGIISGALLQIK-------TLLTLSCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGILQAIAM 218          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 56/172 (32.56%), Postives = 77/172 (44.77%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIG 517
            LGGLLFGYD G  SGA + +Q          NL + Q G VVS  L GA+LG+ ++   +D  GR++ L++                                  A    P Y+AE  PS  RGT+ SL +L ++ GIL  Y           GWR+M G +A  A L+ +G
Sbjct:   15 LGGLLFGYDTGVISGAILFIQKQ-------MNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWRWMLGFAAIPAALLFLG 179          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 55/173 (31.79%), Postives = 76/173 (43.93%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            + GLL GY++G  SGA + ++       T   LS  +  +VVS  + GALL S+    + D  GR+  +I+                                  +     +YIAE  P   RG L+SL EL IV+GILS Y       N   GW+YM+GL  PL +L  I M
Sbjct:   49 VSGLLVGYELGIISGALLQIK-------TLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAM 214          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALL 505
            +GGLLFGYD G  SG  +SL+  +LS      L+ VQ  L+ S +  G+  GSIL + +AD  GR+  L I                                  +    PL+++E  PS+IRG +++L  + I  G L  Y + S        WRY++ LSA  A+L
Sbjct:   48 IGGLLFGYDTGVISGVLLSLKPEDLSLVV---LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAIL 212          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 60/209 (28.71%), Postives = 86/209 (41.15%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMXXXXXXXXXXXXXAVQGKGSLQEYKEQAISALGKLR 628
            + G L GY++G  SGA + ++       T   L+  +  +VVS  L GALL S++   + D  GR+  +I+                                  +     +YIAE  P   RG L+SL EL IV+GIL  Y       N   GW+YM+GL  PL +L  I M                    ++ ++E A   LGKLR
Sbjct:   53 VSGFLVGYELGIISGALLQIR-------TLLVLTCHEQEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTLIGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFANISHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLV---------MKGHEEAASKVLGKLR 245          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 56/173 (32.37%), Postives = 77/173 (44.51%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            LGG L+GYD G  SGA + ++           L+A   GLVVS  L GA+LGS     + D  GRK+ ++                                   +    PLY++E  P   RG L SL +L I +GIL  Y V     +A   WR+M GL+A  +LL+ IG+
Sbjct:   15 LGGALYGYDTGVISGAILFMKKE-------LGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSYIVNYIFADA-EAWRWMLGLAAVPSLLLLIGI 179          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 54/173 (31.21%), Postives = 82/173 (47.40%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            LGGLL+GYD G  SGA + + +          L+ +  GLVVS  L GA+ GS L  + +D  GR++ + +                                  +    P+Y++E  P++IRGTL ++  L IV GIL  Y V ++       WR+M GL+A  A+L+ IG+
Sbjct:   16 LGGLLYGYDTGVISGALLFINND-------IPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIV-NYLFTPFEAWRWMVGLAAVPAVLLLIGI 180          
The following BLAST results are available for this feature:
BLAST of CX295135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
XYLL3_ARATH1.414e-7465.92D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
XYLL2_ARATH7.551e-5248.66D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
XYLL1_ARATH2.353e-4542.86D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
GTR12_MACFA8.720e-1632.37Solute carrier family 2, facilitated glucose trans... [more]
XYLT_LACBR3.314e-1532.56D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
GTR12_HUMAN4.328e-1531.79Solute carrier family 2, facilitated glucose trans... [more]
YD387_YEAST7.382e-1531.55Probable metabolite transport protein YDR387C OS=S... [more]
GTR12_BOVIN2.148e-1428.71Solute carrier family 2, facilitated glucose trans... [more]
YWTG_BACSU6.249e-1432.37Putative metabolite transport protein ywtG OS=Baci... [more]
CSBC_BACSU6.249e-1431.21Probable metabolite transport protein csbC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionC05068H12SK DroRLeaf1 Citrus clementina cDNA clone C05068H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295135 ID=CX295135; Name=CX295135; organism=Citrus clementina; type=EST; length=702bp
TTTGGGAGGATTGTTGTTTGGGTATGACATTGGTGCCACCTCTGGCGCTA
CCATCTCATTGCAGTCGCCCGAGCTTAGTGGCACAACTTGGTTCAACCTT
TCGGCTGTTCAGCTTGGCCTTGTGGTCAGTGGTTCCCTTTATGGAGCTCT
TCTTGGATCCATCCTTGTCTACTCAATTGCAGATTTCCTTGGAAGAAAGC
GGGAGCTTATCATAGCTGCTGTTCTATATGCACTTGGTGCTTTGACCACT
GCCTATGCTCCTGGCCTTGGTGTTCTTTTAGTGGGACGGCTGCTCTATGG
GCTTGGCATCGGTTTGGCCATGCATGGGGCTCCTCTGTATATTGCAGAAA
CTTGCCCATCTCAGATACGTGGAACTCTTATATCTCTAAAGGAGCTCTTC
ATAGTTCTGGGAATTTTGTCGGGTTATTTTGTGGGAAGCTTCCAAATTAA
TGCAGTTGGGGGTTGGCGTTACATGTATGGGCTTAGTGCTCCTCTTGCTT
TGTTGATGGGAATAGGGATGTGGAGTCTTCCTCCATCTCCACGTTGGTTA
CTTCTCAGGGCAGTTCAAGGCAAAGGATCTTTACAAGAATACAAAGAGCA
GGCTATCTCTGCTCTAGGCAAACTAAGGAGGCGGCCTCCTGGTGACAAAC
TGTCTGAGAGACAAATAGAGATACACTTGTATCATTGAAGTCTTCCTATA
CT
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