CX295138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.074e-47 Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAWLNGEFI+TVQQRGAAIIKARK ACDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTAEEL+EEK Sbjct: 217 DAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.926e-46 Identity = 89/108 (82.41%), Postives = 94/108 (87.04%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D WLNGEFI+TVQQRGAAIIKARK ACDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTAEEL EEK Sbjct: 217 DEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.523e-45 Identity = 88/108 (81.48%), Postives = 92/108 (85.19%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAWLNGEFITTVQQRGAAIIKARK ACDHI DWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA EL EEK Sbjct: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.786e-45 Identity = 87/109 (79.82%), Postives = 92/109 (84.40%), Query Frame = -3 Query: 313 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 639 DAWLNGEFITTVQQRGAAIIKARK ACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T EL EEKA Sbjct: 217 DAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKA 325
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 7.557e-45 Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAWL+GEFI+TVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTAEEL EEK Sbjct: 217 DAWLDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 6.397e-44 Identity = 87/108 (80.56%), Postives = 91/108 (84.26%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D WLN EFI+TVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY VPAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA+ELSEEK Sbjct: 217 DEWLNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 6.397e-44 Identity = 86/108 (79.63%), Postives = 91/108 (84.26%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D WLNGEFITTVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY VP+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA+EL+EEK Sbjct: 217 DEWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.478e-32 Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG+ Y VP L+YSFPVT +N W +V+GL+I++FSR+K+DLTA+EL+EEK Sbjct: 216 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.293e-32 Identity = 67/107 (62.62%), Postives = 78/107 (72.90%), Query Frame = -3 Query: 316 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 AW+ FI TVQQRGAAIIKAR A DH+RDW LGTPEG W SM V SDGSY + AGLIYSFPVTCR G++ IV GLS+D+FSR ++D TA EL+EE+ Sbjct: 212 AWVKDTFIPTVQQRGAAIIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 138.272 bits (347), Expect = 3.293e-32 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY VP L+YSFPVT ++ W IV+GL I++FSR+K+DLTA+EL+EEK Sbjct: 216 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEK 324 The following BLAST results are available for this feature:
BLAST of CX295138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295138 ID=CX295138; Name=CX295138; organism=Citrus clementina; type=EST; length=641bpback to top |